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L3_082_090G1_scaffold_1173

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_090G1_scaffold_1173_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..1311
DNA (1311bp) protein (437aa)
Bacterial regulatory s, luxR family protein n=1 Tax=Clostridium difficile F501 RepID=T4AYI6_CLODI
Bacterial regulatory s, luxR family protein {ECO:0000313|EMBL:EQI02742.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
LuxR family transcriptional regulator
L3_082_090G1_scaffold_1173_2
Bifidobacterium boum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1318..2124
DNA (807bp) protein (269aa)
Small-conductance mechanosensitive channel n=1 Tax=Bifidobacterium thermophilum RBL67 RepID=M4RPT7_9BIFI
Mechanosensitive ion channel protein MscS {ECO:0000313|EMBL:KFI47353.1}; TaxID=78343 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium boum.;"
Small-conductance mechanosensitive channel
L3_082_090G1_scaffold_1173_3
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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comp(2121..2678)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T409_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN25460.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
L3_082_090G1_scaffold_1173_4
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

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comp(3299..4369)
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:41 PF7_9FIRM">RepID=R6NPF7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB99497.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
hypothetical protein
L3_082_090G1_scaffold_1173_5
Slackia piriformis, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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comp(4488..5438)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Slackia piriformis YIT 12062 RepID=K0YMI8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EJZ84498.1}; TaxID=742818 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia piriformis YIT 12062.;"
fructose-bisphosphate aldolase
L3_082_090G1_scaffold_1173_6
unknown

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comp(5627..5848)
DNA (222bp) protein (74aa)

This feature has no annotations

L3_082_090G1_scaffold_1173_7
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5848..7335)
DNA (1488bp) protein (496aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CLJ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78886.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
AMP-dependent synthase and ligase
L3_082_090G1_scaffold_1173_8
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(7332..7901)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium succinatutens CAG:287 RepID=R6X0Q0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD09881.1}; TaxID=1263101 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens CAG:287.;"
GNAT family acetyltransferase
L3_082_090G1_scaffold_1173_9
unknown

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comp(7907..8098)
DNA (192bp) protein (64aa)

This feature has no annotations

L3_082_090G1_scaffold_1173_10
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8153..8890)
DNA (738bp) protein (246aa)
Putative uncharacterized protein n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R337_SPISS
hypothetical protein
Tax=BJP_IG2069_Clostridiales_48_15
L3_082_090G1_scaffold_1173_11
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9109..9792)
DNA (684bp) protein (228aa)
Beta-lactamase domain protein id=4530582 bin=GWC2_Deltaproteobacteria_55_46 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
metallo-beta-lactamase
Tax=GWC2_Deltaproteobacteria_55_46b_curated
L3_082_090G1_scaffold_1173_12
Collinsella sp. CAG:289, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(9770..10306)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:289 RepID=R7D7K0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDD86340.1}; TaxID=1262851 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:289.;"
(p)ppGpp synthetase, RelA/SpoT family
Displaying 12 items

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