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L3_082_090G1_scaffold_741

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_090G1_scaffold_741_1
Streptomyces sp. NRRL B-1568, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(2..1297)
DNA (1296bp) protein (432aa)
ABC transporter ATP-binding protein n=1 Tax=Streptomyces sp. W007 RepID=H0B5G7_9ACTO
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJY44020.1}; TaxID=1609106 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL B-1568.;"
ABC transporter
L3_082_090G1_scaffold_741_2
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1294..2127)
DNA (834bp) protein (278aa)
Putative D,D-dipeptide transport system permease protein DdpC n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BNB6_9CLOT
Putative D,D-dipeptide transport system permease protein DdpC {ECO:0000313|EMBL:ERI79644.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
binding-protein-dependent transport systems inner membrane component
L3_082_090G1_scaffold_741_3
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2124..3086)
DNA (963bp) protein (321aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CA61_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34564.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ABC transporter, permease protein
L3_082_090G1_scaffold_741_4
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3140..4636)
DNA (1497bp) protein (499aa)
ABC transporter, substrate-binding protein, family 5 n=2 Tax=Clostridiales RepID=U2DDX3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF54285.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
ABC transporter substrate-binding protein
L3_082_090G1_scaffold_741_5
Olsenella sp. oral taxon 809, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(4908..7526)
DNA (2619bp) protein (873aa)
DNA topoisomerase I (EC:5.99.1.2)
Putative uncharacterized protein n=1 Tax=Olsenella sp. oral taxon 809 str. F0356 RepID=G5F3N8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHF02052.1}; TaxID=661087 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella sp. oral taxon 809 str. F0356.;"
L3_082_090G1_scaffold_741_6
Eggerthella sp. YY7918, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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comp(7530..8207)
DNA (678bp) protein (226aa)
Putative uncharacterized protein n=1 Tax=Eggerthella sp. (strain YY7918) RepID=F7UWS6_EEGSY
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK45643.1}; TaxID=502558 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. (strain YY7918).;"
L3_082_090G1_scaffold_741_7
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(8276..8689)
DNA (414bp) protein (138aa)
Hydrogenase nickel insertion protein HypA n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8Z9_9ACTN
Hydrogenase nickel insertion protein HypA {ECO:0000313|EMBL:KGI74285.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
HybF; Zn finger protein HypA/HybF
L3_082_090G1_scaffold_741_8
Eggerthella sp. CAG:298, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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comp(8727..8903)
DNA (177bp) protein (59aa)
Sec-independent protein translocase protein TatC n=1 Tax=Eggerthella sp. CAG:298 RepID=R7AF47_9ACTN
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=1262876 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:298.;"
protein translocase
L3_082_090G1_scaffold_741_9
Atopobium sp. oral taxon 199, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(8937..9509)
DNA (573bp) protein (191aa)
Sec-independent protein translocase protein TatC n=1 Tax=Atopobium sp. oral taxon 199 str. F0494 RepID=S3A810_9ACTN
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=1203602 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. oral taxon 199 str. F0494.;"
Sec-independent protein translocase subunit TatC
L3_082_090G1_scaffold_741_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9565..10227)
DNA (663bp) protein (221aa)
TatA/E family twin arginine-targeting protein translocase n=2 Tax=Atopobium RepID=N2BF49_9ACTN
sec-independent translocation protein mttA/Hcf106
MttA/Hcf106 family protein {ECO:0000313|EMBL:EQI11929.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
L3_082_090G1_scaffold_741_11
Olsenella sp. oral taxon 809, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10423..10728)
DNA (306bp) protein (102aa)
Anti-sigma factor antagonist n=1 Tax=Olsenella sp. oral taxon 809 str. F0356 RepID=G5F3N5_9ACTN
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=661087 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella sp. oral taxon 809 str. F0356.;"
anti-sigma-factor antagonist
L3_082_090G1_scaffold_741_12
Olsenella sp. oral taxon 809, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10783..11616)
DNA (834bp) protein (278aa)
Putative uncharacterized protein n=1 Tax=Olsenella sp. oral taxon 809 str. F0356 RepID=G5F3N4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHF02048.1}; TaxID=661087 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella sp. oral taxon 809 str. F0356.;"
hypothetical protein
L3_082_090G1_scaffold_741_13
unknown

Not on your lists

comp(11778..12254)
DNA (477bp) protein (159aa)

This feature has no annotations

L3_082_090G1_scaffold_741_14
Collinsella sp. CAG:289, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12331..13731)
DNA (1401bp) protein (467aa)
Cytosine deaminase and related metal-dependent hydrolases n=1 Tax=Collinsella sp. CAG:289 RepID=R7D4T3_9ACTN
Cytosine deaminase and related metal-dependent hydrolases {ECO:0000313|EMBL:CDD85639.1}; TaxID=1262851 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:289.;"
amidohydrolase
L3_082_090G1_scaffold_741_15
Collinsella tanakaei, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(13790..14539)
DNA (750bp) protein (250aa)
Demethylmenaquinone methyltransferase {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; TaxID=742742 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella tanakaei YIT 12063.;"
Demethylmenaquinone methyltransferase n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WH93_9ACTN
ubiquinone biosynthesis methyltransferase UbiE
L3_082_090G1_scaffold_741_16
Adlercreutzia equolifaciens, Adlercreutzia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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comp(14544..15869)
DNA (1326bp) protein (442aa)
Putative transcriptional regulator n=1 Tax=Adlercreutzia equolifaciens DSM 19450 RepID=S6C672_9ACTN
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:BAN77421.1}; TaxID=1384484 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Adlercreutzia.;" source="Adlercreutzia equolifaciens DSM 19450.;"
L3_082_090G1_scaffold_741_17
Collinsella sp. CAG:398, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16077..16367
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:398 RepID=R6YZ93_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDD41413.1}; TaxID=1262852 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:398.;"
3-demethylubiquinone-9 3-methyltransferase
L3_082_090G1_scaffold_741_18
unknown

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16412..17056
DNA (645bp) protein (215aa)

This feature has no annotations

L3_082_090G1_scaffold_741_19
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

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comp(17198..18184)
DNA (987bp) protein (329aa)
ABC transporter substrate-binding protein family 5 n=1 Tax=Collinsella sp. CAG:398 RepID=R6ZA50_9ACTN
family 5 extracellular solute-binding protein
Tax=BJP_IG2102_Coriobacteriales_64_17
Displaying 19 items

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