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L3_082_090G1_scaffold_775

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_090G1_scaffold_775_1
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(136..642)
DNA (507bp) protein (169aa)
UPF0178 protein COLAER_01511 n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAQ3_9ACTN
UPF0178 protein HMPREF9463_00714 {ECO:0000256|HAMAP-Rule:MF_00489}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_082_090G1_scaffold_775_2
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(650..1198)
DNA (549bp) protein (183aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase n=1 Tax=Roseburia sp. CAG:45 RepID=R6NK47_9FIRM
L3_082_090G1_scaffold_775_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1300..2835)
DNA (1536bp) protein (512aa)
Tat (Twin-arginine translocation) pathway signal sequence domain protein n=1 Tax=Clostridium difficile F501 RepID=T4B4U8_CLODI
Tat (Twin-arginine translocation) pathway signal sequence domain protein {ECO:0000313|EMBL:EQI02764.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
fumarate reductase/succinate dehydrogenase
L3_082_090G1_scaffold_775_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3204..4673
DNA (1470bp) protein (490aa)
Bacterial regulatory s, luxR family protein n=1 Tax=Clostridium difficile F501 RepID=T4AYI6_CLODI
Bacterial regulatory s, luxR family protein {ECO:0000313|EMBL:EQI02742.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
transcriptional regulator
L3_082_090G1_scaffold_775_5
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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5034..6869
DNA (1836bp) protein (612aa)
LuxR family Bacterial regulatory protein n=2 Tax=Bacteria RepID=E5XA53_9ACTN
LuxR family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:KGI74790.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
L3_082_090G1_scaffold_775_6
Prevotella sp. CAG:474, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7030..7479)
DNA (450bp) protein (150aa)
Mutator mutT protein n=1 Tax=Prevotella sp. CAG:474 RepID=R6WVH8_9BACT
Mutator mutT protein {ECO:0000313|EMBL:CDC98077.1}; TaxID=1262926 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:474.;"
NUDIX hydrolase
L3_082_090G1_scaffold_775_7
Slackia piriformis, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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comp(7984..8499)
DNA (516bp) protein (172aa)
YbhB/YbcL family Raf kinase inhibitor-like protein n=1 Tax=Slackia piriformis YIT 12062 RepID=K0YYB3_9ACTN
YbhB/YbcL family Raf kinase inhibitor-like protein {ECO:0000313|EMBL:EJZ84604.1}; TaxID=742818 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia piriformis YIT 12062.;"
phospholipid-binding protein
L3_082_090G1_scaffold_775_8
unknown

Not on your lists

comp(8638..9258)
DNA (621bp) protein (207aa)

This feature has no annotations

L3_082_090G1_scaffold_775_9
Eggerthella sp. CAG:298, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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9881..10390
DNA (510bp) protein (170aa)
Ferritin {ECO:0000256|RuleBase:RU361145}; EC=1.16.3.2 {ECO:0000256|RuleBase:RU361145};; TaxID=1262876 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:298.;"
Uncharacterized protein n=1 Tax=Eggerthella sp. CAG:298 RepID=R7B3U9_9ACTN
hypothetical protein
L3_082_090G1_scaffold_775_10
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

10532..11242
DNA (711bp) protein (237aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZIP0_9ACTN
tRNA/rRNA methyltransferase SpoU
L3_082_090G1_scaffold_775_11
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11404..13332)
DNA (1929bp) protein (643aa)
S-layer domain-containing protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JJB4_CELLD
S-layer domain-containing protein
S-layer domain-containing protein {ECO:0000313|EMBL:ADZ84407.1}; Flags: Precursor;; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_082_090G1_scaffold_775_12
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(14156..15706)
DNA (1551bp) protein (517aa)
LuxR family Bacterial regulatory protein n=2 Tax=Eggerthella RepID=E5XA30_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI76225.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
LuxR family transcriptional regulator
L3_082_090G1_scaffold_775_13
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16085..17338)
DNA (1254bp) protein (418aa)
Fumarate reductase/succinate dehydrogenase flavoprotein domain protein n=1 Tax=Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255) RepID=C8WME5_EGGLE
fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein
Fumarate reductase/succinate dehydrogenase flavoprotein domain protein {ECO:0000313|EMBL:ACV56640.1}; Flags: Precursor;; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
Displaying 13 items

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