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L3_082_090G1_scaffold_864

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_090G1_scaffold_864_1
Treponema primitia, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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3..683
DNA (681bp) protein (227aa)
recQ; ATP-dependent DNA helicase RecQ (EC:3.6.1.-)
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:AEF85063.1}; EC=3.6.1.- {ECO:0000313|EMBL:AEF85063.1};; TaxID=545694 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2).;"
ATP-dependent DNA helicase RecQ n=1 Tax=Treponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2) RepID=F5YNS3_TREPZ
L3_082_090G1_scaffold_864_2
Adlercreutzia equolifaciens, Adlercreutzia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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851..1150
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Adlercreutzia equolifaciens DSM 19450 RepID=S6CKH5_9ACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN76270.1}; TaxID=1384484 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Adlercreutzia.;" source="Adlercreutzia equolifaciens DSM 19450.;"
L3_082_090G1_scaffold_864_3
Cryptobacterium curtum, Cryptobacterium, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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1137..1550
DNA (414bp) protein (138aa)
Predicted nucleic-acid-binding protein, contains PIN domain protein n=1 Tax=Cryptobacterium curtum (strain ATCC 700683 / DSM 15641 / 12-3) RepID=C7MLL6_CRYCD
nucleic-acid-binding protein, contains PIN domain protein
Predicted nucleic-acid-binding protein, contains PIN domain protein {ECO:0000313|EMBL:ACU93822.1}; TaxID=469378 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Cryptobacterium.;" source="Cryptobacterium curtum (strain ATCC 700683 / DSM 15641 / 12-3).;"
L3_082_090G1_scaffold_864_4
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1592..2992)
DNA (1401bp) protein (467aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GNW5_9BIFI
Permease of the major facilitator superfamily protein {ECO:0000313|EMBL:KFI60512.1}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
major facilitator superfamily protein
L3_082_090G1_scaffold_864_5
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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3192..4157
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FC44_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEP43616.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
hypothetical protein
L3_082_090G1_scaffold_864_6
Slackia heliotrinireducens, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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4266..4586
DNA (321bp) protein (107aa)
UPF0145 protein Shel_14850 n=1 Tax=Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029 / RHS 1) RepID=C7N6H0_SLAHD
hypothetical protein
UPF0145 protein Shel_14850 {ECO:0000256|HAMAP-Rule:MF_00338}; TaxID=471855 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029; / RHS 1) (Peptococcus heliotrinreducens).;"
L3_082_090G1_scaffold_864_7
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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4794..6536
DNA (1743bp) protein (581aa)
Carbon starvation-induced protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6NF20_9FIRM
Carbon starvation-induced protein {ECO:0000313|EMBL:CDC10753.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
Carbon starvation protein, predicted membrane protein
L3_082_090G1_scaffold_864_8
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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comp(7135..7773)
DNA (639bp) protein (213aa)
Cytoplasmic chaperone TorD family protein n=1 Tax=Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255) RepID=C8WKY1_EGGLE
cytoplasmic chaperone TorD family protein
Cytoplasmic chaperone TorD family protein {ECO:0000313|EMBL:ACV56360.1}; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
L3_082_090G1_scaffold_864_9
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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comp(7825..8997)
DNA (1173bp) protein (391aa)
Polysulphide reductase n=1 Tax=Eggerthella sp. 1_3_56FAA RepID=E5X7F6_9ACTN
polysulfide reductase NrfD
Polysulphide reductase NrfD {ECO:0000313|EMBL:ACV56361.1}; Flags: Precursor;; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
L3_082_090G1_scaffold_864_10
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9010..9624)
DNA (615bp) protein (205aa)
4Fe-4S binding domain-containing protein n=3 Tax=Bacteria RepID=E5X5B2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI76269.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
4Fe-4S ferredoxin
L3_082_090G1_scaffold_864_11
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9634..12060)
DNA (2427bp) protein (809aa)
dehydrogenase n=1 Tax=Desulfitobacterium hafniense RepID=UPI00036270FA
anaerobic dehydrogenase
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EHL07829.1}; TaxID=537010 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense DP7.;"
L3_082_090G1_scaffold_864_12
unknown

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comp(12247..12879)
DNA (633bp) protein (211aa)

This feature has no annotations

L3_082_090G1_scaffold_864_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13499..15064)
DNA (1566bp) protein (522aa)
Bacterial regulatory s, luxR family protein n=1 Tax=Clostridium difficile F501 RepID=T4B6M1_CLODI
LuxR family transcriptional regulator
Bacterial regulatory s, luxR family protein {ECO:0000313|EMBL:EQI03399.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
Displaying 13 items

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