ggKbase home page

L3_082_090G1_scaffold_951

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_090G1_scaffold_951_1
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1..792)
DNA (792bp) protein (264aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
1-deoxy-D-xylulose-5-phosphate synthase n=3 Tax=Bacteria RepID=E5XBE3_9ACTN
deoxyxylulose-5-phosphate synthase
L3_082_090G1_scaffold_951_2
Collinsella sp. CAG:398, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(807..1106)
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Coriobacteriaceae RepID=UPI000349D091
Uncharacterized protein {ECO:0000313|EMBL:CDD42860.1}; TaxID=1262852 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:398.;"
hypothetical protein
L3_082_090G1_scaffold_951_3
Olsenella sp. oral taxon 809, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1093..1671)
DNA (579bp) protein (193aa)
N utilization substance protein B homolog n=1 Tax=Olsenella sp. oral taxon 809 str. F0356 RepID=G5F5K8_9ACTN
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=661087 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella sp. oral taxon 809 str. F0356.;"
NusB antitermination factor
L3_082_090G1_scaffold_951_4
Collinsella tanakaei, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1675..2037)
DNA (363bp) protein (121aa)
Putative uncharacterized protein n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WGK9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EGX67460.1}; TaxID=742742 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella tanakaei YIT 12063.;"
hypothetical protein
L3_082_090G1_scaffold_951_5
Collinsella sp. CAG:289, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(2047..3402)
DNA (1356bp) protein (452aa)
biotin carboxylase/acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha (EC:6.4.1.2)
Acetyl-CoA carboxylase biotin carboxylase subunit n=1 Tax=Collinsella sp. CAG:289 RepID=R7D2J1_9ACTN
Acetyl-CoA carboxylase biotin carboxylase subunit {ECO:0000313|EMBL:CDD83973.1}; TaxID=1262851 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:289.;"
L3_082_090G1_scaffold_951_6
Coriobacteriaceae bacterium 68-1-3, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3406..5301)
DNA (1896bp) protein (632aa)
Acetyl-CoA carboxylase biotin carboxyl carrier protein n=1 Tax=Eggerthella sp. CAG:298 RepID=R7B6H1_9ACTN
acetyl-CoA carboxylase
Acetyl-CoA carboxylase {ECO:0000313|EMBL:AJC12674.1}; TaxID=1531429 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae.;" source="Coriobacteriaceae bacterium 68-1-3.;"
L3_082_090G1_scaffold_951_7
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(5477..6610)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BWB2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ42860.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
family 2 glycosyl transferase
L3_082_090G1_scaffold_951_8
unknown

Not on your lists

comp(6607..8070)
DNA (1464bp) protein (488aa)

This feature has no annotations

L3_082_090G1_scaffold_951_9
unknown

Not on your lists

comp(8081..9094)
DNA (1014bp) protein (338aa)

This feature has no annotations

L3_082_090G1_scaffold_951_10
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


comp(9099..11570)
DNA (2472bp) protein (824aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W7P1_ATOPD
L3_082_090G1_scaffold_951_11
Olsenella uli, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


comp(11925..13001)
DNA (1077bp) protein (359aa)
phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=1190621 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella uli MSTE5.;"
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Olsenella uli (strain ATCC 49627 / DSM 7084 / CIP 109912 / JCM 12494 / VPI D76D-27C) RepID=E1QZ45_OLSUV
Displaying 11 items

View Taxonomy