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L3_082_361G1_scaffold_397

Search features with annotation key words

Displaying items 1-30 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_361G1_scaffold_397_1
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(217..690)
DNA (474bp) protein (158aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5G3Q9_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY11773.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
L3_082_361G1_scaffold_397_2
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

978..4526
DNA (3549bp) protein (1183aa)
ATP-dependent nuclease subunit B n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GU18_9FIRM
ATP-dependent nuclease subunit B
ATP-dependent nuclease subunit B {ECO:0000313|EMBL:CBL41310.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_082_361G1_scaffold_397_3
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4526..8197
DNA (3672bp) protein (1224aa)
ATP-dependent helicase/nuclease subunit A {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00044589}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00274943};; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00145970};; ATP-dependent helicase/nuclease AddA {ECO:0000256|HAMAP-Rule:MF_01451}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
ATP-dependent helicase/nuclease subunit A n=1 Tax=Clostridium sp. CAG:81 RepID=R5GGX2_9CLOT
ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains)
L3_082_361G1_scaffold_397_4
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8411..9031)
DNA (621bp) protein (207aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GU15_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL41307.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_082_361G1_scaffold_397_5
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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9240..10166
DNA (927bp) protein (309aa)
Zn-dependent hydrolases, including glyoxylases n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GU13_9FIRM
Zn-dependent hydrolases, including glyoxylases
Zn-dependent hydrolases, including glyoxylases {ECO:0000313|EMBL:CBL41305.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_082_361G1_scaffold_397_6
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10144..10812
DNA (669bp) protein (223aa)
Dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase {ECO:0000313|EMBL:CBL41304.1}; EC=1.5.1.3 {ECO:0000313|EMBL:CBL41304.1};; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Dihydrofolate reductase n=2 Tax=Clostridiales RepID=D7GU12_9FIRM
L3_082_361G1_scaffold_397_7
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11282..12166
DNA (885bp) protein (295aa)
sulfide dehydrogenase (flavoprotein) subunit SudB (EC:1.97.-.- 1.18.1.2)
Sulfide dehydrogenase (Flavoprotein) subunit SudB {ECO:0000313|EMBL:CBL41303.1}; EC=1.18.1.2 {ECO:0000313|EMBL:CBL41303.1};; EC=1.97.-.- {ECO:0000313|EMBL:CBL41303.1};; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Sulfide dehydrogenase (Flavoprotein) subunit SudB n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GU11_9FIRM
L3_082_361G1_scaffold_397_8
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12189..13583
DNA (1395bp) protein (465aa)
sulfide dehydrogenase (flavoprotein) subunit SudA (EC:1.4.1.13 1.4.1.14 1.97.-.-)
Sulfide dehydrogenase (Flavoprotein) subunit SudA n=2 Tax=Clostridiales RepID=D7GU10_9FIRM
Sulfide dehydrogenase (Flavoprotein) subunit SudA {ECO:0000313|EMBL:CCY11751.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
L3_082_361G1_scaffold_397_9
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13768..15159
DNA (1392bp) protein (464aa)
Putative efflux protein, MATE family n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GU09_9FIRM
putative efflux protein, MATE family
Putative efflux protein, MATE family {ECO:0000313|EMBL:CBL41301.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_082_361G1_scaffold_397_10
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15435..16688)
DNA (1254bp) protein (418aa)
Site-specific recombinase, phage integrase family n=2 Tax=Ruminococcus torques ATCC 27756 RepID=A5KQB9_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EDK23309.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
Phage integrase family.
L3_082_361G1_scaffold_397_11
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16894..17340)
DNA (447bp) protein (149aa)
Predicted Zn peptidase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IRU3_9CLOT
Predicted Zn peptidase {ECO:0000313|EMBL:CCY42984.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Predicted Zn peptidase
L3_082_361G1_scaffold_397_12
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17350..17781)
DNA (432bp) protein (144aa)
DNA-binding helix-turn-helix protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZPP4_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDM88840.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
Helix-turn-helix.
L3_082_361G1_scaffold_397_13
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18011..18217
DNA (207bp) protein (69aa)
DNA-binding helix-turn-helix protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZPP3_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDM88839.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
Helix-turn-helix.
L3_082_361G1_scaffold_397_14
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18223..19002
DNA (780bp) protein (260aa)
AntA/AntB antirepressor n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B3Q4_RUMGN
AntA/AntB antirepressor {ECO:0000313|EMBL:EDN77580.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L3_082_361G1_scaffold_397_15
unknown

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18992..19270
DNA (279bp) protein (93aa)

This feature has no annotations

L3_082_361G1_scaffold_397_16
unknown

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19315..19650
DNA (336bp) protein (112aa)

This feature has no annotations

L3_082_361G1_scaffold_397_17
unknown

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comp(19566..19955)
DNA (390bp) protein (130aa)

This feature has no annotations

L3_082_361G1_scaffold_397_18
unknown

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20151..20417
DNA (267bp) protein (89aa)

This feature has no annotations

L3_082_361G1_scaffold_397_19
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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20389..20715
DNA (327bp) protein (109aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWH2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL66993.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L3_082_361G1_scaffold_397_20
unknown

Not on your lists

20684..20917
DNA (234bp) protein (78aa)

This feature has no annotations

L3_082_361G1_scaffold_397_21
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

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21007..22998
DNA (1992bp) protein (664aa)
Phage-related protein n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BHE4_9FIRM
Phage-related protein {ECO:0000313|EMBL:CDD64937.1}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
hypothetical protein
L3_082_361G1_scaffold_397_22
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22995..23219
DNA (225bp) protein (75aa)
Uncharacterized protein n=2 Tax=Clostridium bolteae RepID=R0BHV0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ50868.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
L3_082_361G1_scaffold_397_23
unknown

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23212..23487
DNA (276bp) protein (92aa)

This feature has no annotations

L3_082_361G1_scaffold_397_24
unknown

Not on your lists

23489..23674
DNA (186bp) protein (62aa)

This feature has no annotations

L3_082_361G1_scaffold_397_25
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23674..24786
DNA (1113bp) protein (371aa)
Uncharacterized protein n=2 Tax=Clostridium bolteae RepID=R0AF43_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ50865.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
Hypothetical protein
L3_082_361G1_scaffold_397_26
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24788..25519
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9XB15_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12405.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
Metal-dependent hydrolases of the beta-lactamase superfamily I
L3_082_361G1_scaffold_397_27
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25544..25996
DNA (453bp) protein (151aa)
Single-stranded DNA-binding protein n=2 Tax=Clostridium RepID=D3ABY1_9CLOT
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
single-strand binding protein
L3_082_361G1_scaffold_397_28
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26011..26613
DNA (603bp) protein (201aa)
Uncharacterized protein n=2 Tax=Clostridium bolteae RepID=R0BHX1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ50853.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
hypothetical protein
L3_082_361G1_scaffold_397_29
unknown

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26615..26947
DNA (333bp) protein (111aa)

This feature has no annotations

L3_082_361G1_scaffold_397_30
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26893..27711
DNA (819bp) protein (273aa)
Gp49-like protein n=1 Tax=Clostridium botulinum CFSAN001628 RepID=L1LPG7_CLOBO
gp49-like protein
Gp49 homologous {ECO:0000313|EMBL:ACA46388.1}; TaxID=498213 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Okra / Type B1).;"
Displaying items 1-30 of 66 in total

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