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L3_082_361G1_scaffold_643

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Displaying items 1-30 of 37 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_361G1_scaffold_643_1
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(158..1132)
DNA (975bp) protein (325aa)
PPIC-type PPIASE domain. (EC:5.2.1.8)
PPIC-type PPIASE domain {ECO:0000313|EMBL:CBL42748.1}; EC=5.2.1.8 {ECO:0000313|EMBL:CBL42748.1};; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
PPIC-type PPIASE domain n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GPL3_9FIRM
L3_082_361G1_scaffold_643_2
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1149..1781)
DNA (633bp) protein (211aa)
Maf-like protein CK3_33400 n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GPL4_9FIRM
MAF protein
Maf-like protein CK3_33400 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_082_361G1_scaffold_643_3
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(1882..3270)
DNA (1389bp) protein (463aa)
glycyl-tRNA synthetase, dimeric type (EC:6.1.1.14)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
Glycine--tRNA ligase n=2 Tax=Clostridiales RepID=D7GPL5_9FIRM
L3_082_361G1_scaffold_643_4
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3413..4150)
DNA (738bp) protein (246aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GPL6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL42751.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_082_361G1_scaffold_643_5
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4178..4831)
DNA (654bp) protein (218aa)
DNA repair protein RecO n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GPL7_9FIRM
DNA replication and repair protein RecO
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_082_361G1_scaffold_643_6
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4835..5737)
DNA (903bp) protein (301aa)
GTPase Era n=2 Tax=Clostridiales RepID=D7GPL8_9FIRM
GTP-binding protein Era
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
L3_082_361G1_scaffold_643_7
unknown

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comp(5919..6032)
DNA (114bp) protein (38aa)

This feature has no annotations

L3_082_361G1_scaffold_643_8
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6155..9088)
DNA (2934bp) protein (978aa)
Predicted Zn-dependent peptidases, insulinase-like n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GPL9_9FIRM
Predicted Zn-dependent peptidases, insulinase-like {ECO:0000313|EMBL:CBL42754.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Predicted Zn-dependent peptidases, insulinase-like
L3_082_361G1_scaffold_643_9
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9346..10194)
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:81 RepID=R5G5Y1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY12518.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
hypothetical protein
L3_082_361G1_scaffold_643_10
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10324..11553)
DNA (1230bp) protein (410aa)
Collagenase and related proteases (EC:3.4.-.-)
Collagenase and related proteases {ECO:0000313|EMBL:CBL42756.1}; EC=3.4.-.- {ECO:0000313|EMBL:CBL42756.1};; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Collagenase and related proteases n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GPM1_9FIRM
L3_082_361G1_scaffold_643_11
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11624..12283)
DNA (660bp) protein (220aa)
Predicted O-methyltransferase n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GPM2_9FIRM
Predicted O-methyltransferase
Predicted O-methyltransferase {ECO:0000313|EMBL:CBL42757.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_082_361G1_scaffold_643_12
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12280..12837)
DNA (558bp) protein (186aa)
YceG-like family n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GPM3_9FIRM
YceG-like family.
YceG-like family {ECO:0000313|EMBL:CBL42758.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_082_361G1_scaffold_643_13
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12854..14530)
DNA (1677bp) protein (559aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:81 RepID=R5GI79_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY12522.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
RNA-metabolising metallo-beta-lactamase
L3_082_361G1_scaffold_643_14
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14511..14993)
DNA (483bp) protein (161aa)
Fe2+/Zn2+ uptake regulation proteins n=1 Tax=Clostridium sp. CAG:81 RepID=R5G5Y6_9CLOT
Fe2+/Zn2+ uptake regulation proteins {ECO:0000313|EMBL:CCY12523.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
Fe2+/Zn2+ uptake regulation proteins
L3_082_361G1_scaffold_643_15
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15208..15477)
DNA (270bp) protein (90aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5G9H7_9CLOT
Protein of unknown function (DUF1292).
Uncharacterized protein {ECO:0000313|EMBL:CCY12524.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
L3_082_361G1_scaffold_643_16
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15537..15971)
DNA (435bp) protein (145aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
Putative Holliday junction resolvase n=1 Tax=Clostridium sp. CAG:81 RepID=R5G5H5_9CLOT
conserved hypothetical protein TIGR00250
L3_082_361G1_scaffold_643_17
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16062..16325)
DNA (264bp) protein (88aa)
UPF0297 protein BN789_01569 n=1 Tax=Clostridium sp. CAG:81 RepID=R5GJ71_9CLOT
UPF0297 protein BN789_01569 {ECO:0000256|HAMAP-Rule:MF_01507}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
hypothetical protein
L3_082_361G1_scaffold_643_18
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16526..17851)
DNA (1326bp) protein (442aa)
MiaB-like tRNA modifying enzyme (EC:1.3.1.74)
MiaB-like tRNA modifying enzyme n=1 Tax=Clostridium sp. CAG:81 RepID=R5GI84_9CLOT
MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:CCY12527.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
L3_082_361G1_scaffold_643_19
unknown

Not on your lists

comp(17971..18426)
DNA (456bp) protein (152aa)

This feature has no annotations

L3_082_361G1_scaffold_643_20
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18428..19651)
DNA (1224bp) protein (408aa)
Probable tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094284}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; Thiamine biosynthesis protein ThiI {ECO:0000256|HAMAP-Rule:MF_00021}; tRNA 4-thiouridine synthase {ECO:0000256|HAMAP-Rule:MF_00021}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Probable tRNA sulfurtransferase n=2 Tax=Clostridiales RepID=D7GPN0_9FIRM
thiazole biosynthesis/tRNA modification protein ThiI
L3_082_361G1_scaffold_643_21
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19741..20904)
DNA (1164bp) protein (388aa)
Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes (EC:2.8.1.7)
Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes {ECO:0000313|EMBL:CBL42766.1}; EC=2.8.1.7 {ECO:0000313|EMBL:CBL42766.1};; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GPN1_9FIRM
L3_082_361G1_scaffold_643_22
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20989..21771)
DNA (783bp) protein (261aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
RNA methyltransferase, RsmE family (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Clostridium sp. CAG:81 RepID=R5GJ73_9CLOT
L3_082_361G1_scaffold_643_23
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21741..22697)
DNA (957bp) protein (319aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
[LSU ribosomal protein L11P]-lysine N-methyltransferase (EC:2.1.1.-)
Ribosomal protein L11 methyltransferase n=1 Tax=Clostridium sp. CAG:81 RepID=R5GI88_9CLOT
L3_082_361G1_scaffold_643_24
unknown

Not on your lists

comp(22694..22825)
DNA (132bp) protein (44aa)

This feature has no annotations

L3_082_361G1_scaffold_643_25
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23150..23851)
DNA (702bp) protein (234aa)
Demethylmenaquinone methyltransferase n=1 Tax=Clostridium sp. CAG:81 RepID=R5G9I3_9CLOT
Demethylmenaquinone methyltransferase {ECO:0000313|EMBL:CCY12534.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
Demethylmenaquinone methyltransferase
L3_082_361G1_scaffold_643_26
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24233..25183
DNA (951bp) protein (317aa)
Transcriptional regulator n=1 Tax=Clostridium sp. CAG:81 RepID=R5G5I4_9CLOT
Transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CCY12535.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
L3_082_361G1_scaffold_643_27
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25258..26406)
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RSI4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC50615.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
hypothetical protein
L3_082_361G1_scaffold_643_28
unknown

Not on your lists

comp(26376..26468)
DNA (93bp) protein (31aa)

This feature has no annotations

L3_082_361G1_scaffold_643_29
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26499..28001)
DNA (1503bp) protein (501aa)
Uncharacterized protein conserved in bacteria n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GPN7_9FIRM
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CBL42772.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_082_361G1_scaffold_643_30
unknown

Not on your lists

comp(28017..28478)
DNA (462bp) protein (154aa)

This feature has no annotations

Displaying items 1-30 of 37 in total

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