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L3_082_361G1_scaffold_811

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_361G1_scaffold_811_1
unknown

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1..99
DNA (99bp) protein (33aa)

This feature has no annotations

L3_082_361G1_scaffold_811_2
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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201..1130
DNA (930bp) protein (310aa)
Hpr(Ser) kinase/phosphatase (EC:2.7.1.- 2.7.4.- 2.7.11.-)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058427};; EC=2.7.4.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058435};; HPr(Ser) kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
HPr kinase/phosphorylase n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GR60_9FIRM
L3_082_361G1_scaffold_811_3
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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1146..2015
DNA (870bp) protein (290aa)
UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GR59_9FIRM
L3_082_361G1_scaffold_811_4
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2068..2913
DNA (846bp) protein (282aa)
UPF0042 nucleotide-binding protein BN789_01493 n=1 Tax=Clostridium sp. CAG:81 RepID=R5G548_9CLOT
Nucleotide-binding protein BN789_01493 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
hypothetical protein
L3_082_361G1_scaffold_811_5
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2958..3875
DNA (918bp) protein (306aa)
Putative sporulation transcription regulator WhiA n=1 Tax=Clostridium sp. CAG:81 RepID=R5GIX1_9CLOT
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420, ECO:0000256|SAAS:SAAS00005305}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
hypothetical protein
L3_082_361G1_scaffold_811_6
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3923..4177
DNA (255bp) protein (85aa)
Phosphotransferase System HPr (HPr) Family n=2 Tax=Clostridiales RepID=D7GR57_9FIRM
Phosphotransferase System HPr (HPr) Family
Phosphotransferase System HPr (HPr) Family {ECO:0000313|EMBL:CCY12452.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
L3_082_361G1_scaffold_811_7
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4271..7750
DNA (3480bp) protein (1160aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
DNA polymerase III catalytic subunit, DnaE type (EC:2.7.7.7)
DNA polymerase III catalytic subunit DnaE type n=1 Tax=Clostridium sp. CAG:81 RepID=R5G5N1_9CLOT
L3_082_361G1_scaffold_811_8
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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7932..8924
DNA (993bp) protein (331aa)
6-phosphofructokinase (EC:2.7.1.11)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339, ECO:0000313|EMBL:CBL40280.1};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
6-phosphofructokinase n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GR55_9FIRM
L3_082_361G1_scaffold_811_9
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8985..9362
DNA (378bp) protein (126aa)
Transcriptional regulator, ArsR family n=2 Tax=Clostridiales RepID=D7GR54_9FIRM
transcriptional regulator, ArsR family
Transcriptional regulator ArsR family {ECO:0000313|EMBL:CCY12455.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
L3_082_361G1_scaffold_811_10
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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9374..10153
DNA (780bp) protein (260aa)
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Diaminopimelate epimerase n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GR53_9FIRM
L3_082_361G1_scaffold_811_11
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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10384..10821
DNA (438bp) protein (146aa)
Transcriptional regulator, AsnC family n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GR52_9FIRM
transcriptional regulator, AsnC family
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:CBL40277.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_082_361G1_scaffold_811_12
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11181..11294)
DNA (114bp) protein (38aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GR51_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL40276.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_082_361G1_scaffold_811_13
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11487..12272
DNA (786bp) protein (262aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:81 RepID=R5G992_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY12459.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
L3_082_361G1_scaffold_811_14
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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12400..13092
DNA (693bp) protein (231aa)
Cytidylate kinase n=2 Tax=Clostridiales RepID=D7GR50_9FIRM
Cytidylate kinase
Cytidylate kinase {ECO:0000313|EMBL:CBL40275.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_082_361G1_scaffold_811_15
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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13280..13930
DNA (651bp) protein (217aa)
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GR49_9FIRM
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E {ECO:0000313|EMBL:CBL40274.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_082_361G1_scaffold_811_16
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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14171..14542
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GR48_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL40273.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_082_361G1_scaffold_811_17
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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14601..15347
DNA (747bp) protein (249aa)
Putative cell wall binding repeat n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GR47_9FIRM
Putative cell wall binding repeat.
Putative cell wall binding repeat {ECO:0000313|EMBL:CBL40272.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_082_361G1_scaffold_811_18
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15344..16303
DNA (960bp) protein (320aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
tRNA-dihydrouridine synthase n=2 Tax=Clostridiales RepID=D7GR46_9FIRM
tRNA-U20-dihydrouridine synthase
L3_082_361G1_scaffold_811_19
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16424..17821)
DNA (1398bp) protein (466aa)
Predicted ATPase (AAA+ superfamily) n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GR45_9FIRM
Predicted ATPase (AAA+ superfamily)
Predicted ATPase (AAA+ superfamily) {ECO:0000313|EMBL:CBL40270.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_082_361G1_scaffold_811_20
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18120..18803)
DNA (684bp) protein (228aa)
Transcriptional regulator, GntR family n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GR44_9FIRM
transcriptional regulator, GntR family
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CBL40269.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_082_361G1_scaffold_811_21
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19147..20172
DNA (1026bp) protein (342aa)
Threonine dehydrogenase and related Zn-dependent dehydrogenases n=1 Tax=Clostridium sp. CAG:81 RepID=R5GIY9_9CLOT
Threonine dehydrogenase and related Zn-dependent dehydrogenases {ECO:0000313|EMBL:CCY12466.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
Threonine dehydrogenase and related Zn-dependent dehydrogenases
L3_082_361G1_scaffold_811_22
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20333..21436
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:81 RepID=R5GHZ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY12467.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
TRAP-type C4-dicarboxylate transport system, periplasmic component
L3_082_361G1_scaffold_811_23
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21523..22032
DNA (510bp) protein (170aa)
TRAP-type C4-dicarboxylate transport system small permease component n=1 Tax=Clostridium sp. CAG:81 RepID=R5G5Q1_9CLOT
TRAP-type C4-dicarboxylate transport system small permease component {ECO:0000313|EMBL:CCY12468.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
TRAP-type C4-dicarboxylate transport system, small permease component
L3_082_361G1_scaffold_811_24
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22025..23311
DNA (1287bp) protein (429aa)
TRAP transporter DctM subunit n=1 Tax=Clostridium sp. CAG:81 RepID=R5G9A2_9CLOT
TRAP transporter DctM subunit {ECO:0000313|EMBL:CCY12469.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
TRAP transporter, DctM subunit
L3_082_361G1_scaffold_811_25
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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23732..24823
DNA (1092bp) protein (364aa)
Tripartite ATP-independent periplasmic transporter solute receptor, DctP family n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GR39_9FIRM
tripartite ATP-independent periplasmic transporter solute receptor, DctP family
Tripartite ATP-independent periplasmic transporter solute receptor, DctP family {ECO:0000313|EMBL:CBL40264.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_082_361G1_scaffold_811_26
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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24936..25439
DNA (504bp) protein (168aa)
TRAP-type C4-dicarboxylate transport system, small permease component n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GR38_9FIRM
TRAP-type C4-dicarboxylate transport system, small permease component
TRAP-type C4-dicarboxylate transport system, small permease component {ECO:0000313|EMBL:CBL40263.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_082_361G1_scaffold_811_27
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25439..26725
DNA (1287bp) protein (429aa)
TRAP transporter, DctM subunit n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GR37_9FIRM
TRAP transporter, DctM subunit
TRAP transporter, DctM subunit {ECO:0000313|EMBL:CBL40262.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_082_361G1_scaffold_811_28
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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26806..27669
DNA (864bp) protein (288aa)
Uncharacterized conserved protein (DUF2088) n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GR36_9FIRM
Uncharacterized conserved protein (DUF2088).
Uncharacterized conserved protein (DUF2088) {ECO:0000313|EMBL:CBL40261.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Displaying 28 items

View Taxonomy