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L3_083_000G1_scaffold_3542

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_000G1_scaffold_3542_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(289..1629)
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GP20_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH00451.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L3_083_000G1_scaffold_3542_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1759..2073)
DNA (315bp) protein (105aa)
ABC transporter related n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GP18_BIFLS
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACJ51630.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_083_000G1_scaffold_3542_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2278..3402)
DNA (1125bp) protein (375aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8ASP0_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:KEY31544.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
hypothetical protein
L3_083_000G1_scaffold_3542_4
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3469..4170)
DNA (702bp) protein (234aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R9INF1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOT26977.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
Septation ring formation regulator ezrA
L3_083_000G1_scaffold_3542_5
Bifidobacterium callitrichos, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4552..5088
DNA (537bp) protein (179aa)
Uncharacterized protein n=5 Tax=Bifidobacterium longum RepID=B3DQX9_BIFLD
Uncharacterized protein {ECO:0000313|EMBL:KFI56187.1}; TaxID=1437609 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium callitrichos DSM 23973.;"
hypothetical protein
L3_083_000G1_scaffold_3542_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5528..6490)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GP04_BIFLS
Uncharacterized protein {ECO:0000313|EMBL:KEY31546.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
Hypothetical protein
L3_083_000G1_scaffold_3542_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6621..7409
DNA (789bp) protein (263aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GP03_BIFLS
LuxR family transcriptional regulator {ECO:0000313|EMBL:KEY31547.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
two component transcriptional regulator, LuxR family
L3_083_000G1_scaffold_3542_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7406..8566
DNA (1161bp) protein (387aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GP02_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ51614.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_083_000G1_scaffold_3542_9
unknown

Not on your lists

comp(8560..8730)
DNA (171bp) protein (57aa)

This feature has no annotations

L3_083_000G1_scaffold_3542_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8979..9782)
DNA (804bp) protein (268aa)
Phage integrase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GP01_BIFLS
phage integrase
Phage integrase family protein {ECO:0000313|EMBL:ACJ51613.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_083_000G1_scaffold_3542_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9779..10246)
DNA (468bp) protein (156aa)
Phage integrase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GP01_BIFLS
phage integrase
Phage integrase family protein {ECO:0000313|EMBL:ACJ51613.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_083_000G1_scaffold_3542_12
unknown

Not on your lists

comp(10405..10650)
DNA (246bp) protein (82aa)

This feature has no annotations

L3_083_000G1_scaffold_3542_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10728..11969)
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GNZ9_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ51611.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_083_000G1_scaffold_3542_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11972..13174)
DNA (1203bp) protein (401aa)
Phosphoribosylglycinamide synthetase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GNZ8_BIFLS
hypothetical protein
Phosphoribosylglycinamide synthetase {ECO:0000313|EMBL:ACJ51610.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_083_000G1_scaffold_3542_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13180..14406)
DNA (1227bp) protein (409aa)
Major facilitator superfamily MFS_1 n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GNZ7_BIFLS
2-acyl-glycerophospho-ethanolamine acyltransferase {ECO:0000313|EMBL:CEE96648.1}; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
hypothetical protein
L3_083_000G1_scaffold_3542_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14387..14728)
DNA (342bp) protein (114aa)
Flavodoxin/nitric oxide synthase n=2 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GNZ6_BIFLS
flavodoxin/nitric oxide synthase
Flavodoxin/nitric oxide synthase {ECO:0000313|EMBL:ACJ51608.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_083_000G1_scaffold_3542_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14745..14972)
DNA (228bp) protein (76aa)
Putative dehydrogenase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GNZ5_BIFLS
hypothetical protein
Putative dehydrogenase {ECO:0000313|EMBL:ACJ51607.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_083_000G1_scaffold_3542_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14938..16032)
DNA (1095bp) protein (365aa)
Putative dehydrogenase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GNZ5_BIFLS
hypothetical protein
Putative dehydrogenase {ECO:0000313|EMBL:ACJ51607.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_083_000G1_scaffold_3542_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16151..16630)
DNA (480bp) protein (160aa)
Phage integrase family protein n=2 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GNZ1_BIFLS
phage integrase family protein
Phage integrase family protein {ECO:0000313|EMBL:ACJ51603.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_083_000G1_scaffold_3542_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16667..16927
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GNZ0_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ51602.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_083_000G1_scaffold_3542_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17367..18155)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GNY9_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ51601.1}; Flags: Precursor;; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_083_000G1_scaffold_3542_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18152..18943)
DNA (792bp) protein (264aa)
Daunorubicin/doxorubicin resistance ATP-binding protein DrrA {ECO:0000313|EMBL:CEF02365.1}; EC=3.6.3.- {ECO:0000313|EMBL:CEF02365.1};; Flags: Precursor;; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
ABC transporter related n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GNY8_BIFLS
putative ABC transporter ATP-binding protein
L3_083_000G1_scaffold_3542_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18927..19139)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GNY7_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ51599.1}; Flags: Precursor;; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_083_000G1_scaffold_3542_24
unknown

Not on your lists

comp(19111..19224)
DNA (114bp) protein (38aa)

This feature has no annotations

L3_083_000G1_scaffold_3542_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19233..19775)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GNY6_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ51598.1}; Flags: Precursor;; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_083_000G1_scaffold_3542_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19793..20086)
DNA (294bp) protein (98aa)
Uncharacterized protein {ECO:0000313|EMBL:KEY31556.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
hypothetical protein
L3_083_000G1_scaffold_3542_27
unknown

Not on your lists

comp(20131..20241)
DNA (111bp) protein (37aa)

This feature has no annotations

L3_083_000G1_scaffold_3542_28
Geobacillus sp. CAMR12739, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21310..21945)
DNA (636bp) protein (212aa)
ABC transporter related protein n=2 Tax=Geobacillus RepID=D7D2C8_GEOSC
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KDE48904.1}; TaxID=1482738 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus sp. CAMR12739.;"
ABC transporter
L3_083_000G1_scaffold_3542_29
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21938..24103)
DNA (2166bp) protein (722aa)
CirC protein n=1 Tax=Clostridium beijerinckii RepID=Q7WYU0_CLOBE
CirC protein {ECO:0000313|EMBL:CAD97582.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
hypothetical protein
L3_083_000G1_scaffold_3542_30
Geobacillus thermoleovorans, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24213..24524)
DNA (312bp) protein (104aa)
Bacteriocin AS-48 n=3 Tax=Geobacillus RepID=G8N719_GEOTH
hypothetical protein
Bacteriocin AS-48 {ECO:0000313|EMBL:AEV18125.1}; TaxID=1111068 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus; Geobacillus thermoleovorans group.;" source="Geobacillus thermoleovorans CCB_US3_UF5.;"
Displaying items 1-30 of 32 in total

View Taxonomy