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L3_083_000G1_scaffold_1983

Search features with annotation key words

Displaying items 1-30 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_000G1_scaffold_1983_1
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3..905)
DNA (903bp) protein (301aa)
Histidine kinase n=3 Tax=Bacteroidales RepID=D0T9H8_9BACE
Histidine kinase {ECO:0000313|EMBL:EEY85180.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
two-component system sensor histidine kinase
L3_083_000G1_scaffold_1983_2
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(909..2219)
DNA (1311bp) protein (437aa)
Outer membrane efflux protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0T9H7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KEJ87139.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
outer membrane protein
L3_083_000G1_scaffold_1983_3
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2229..5270)
DNA (3042bp) protein (1014aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6AGM5_9PORP
Export membrane family protein {ECO:0000313|EMBL:KDS68515.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
AcrB/AcrD/AcrF family transporter
L3_083_000G1_scaffold_1983_4
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5276..6316)
DNA (1041bp) protein (347aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6AGY6_9PORP
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:KDS68474.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
multidrug efflux system protein
L3_083_000G1_scaffold_1983_5
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6600..7190
DNA (591bp) protein (197aa)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
Thymidine kinase n=3 Tax=Bacteroidales RepID=K6B8A6_9PORP
thymidine kinase
L3_083_000G1_scaffold_1983_6
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7240..7986
DNA (747bp) protein (249aa)
tRNA/rRNA methyltransferase n=3 Tax=Parabacteroides RepID=A6L9W4_PARD8
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:KEJ87135.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
tRNA/rRNA methyltransferase
L3_083_000G1_scaffold_1983_7
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8014..8394
DNA (381bp) protein (127aa)
Endoribonuclease L-PSP n=8 Tax=Bacteroidales RepID=D7IQ14_9BACE
translation initiation inhibitor endoribonuclease L-PSP
Putative endoribonuclease L-PSP {ECO:0000313|EMBL:EFK62845.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_083_000G1_scaffold_1983_8
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8521..10371)
DNA (1851bp) protein (617aa)
UPF0313 protein HMPREF1075_01905 n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6AGM1_9PORP
UPF0313 protein HMPREF1002_01304 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L3_083_000G1_scaffold_1983_9
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10526..11527
DNA (1002bp) protein (334aa)
Malate dehydrogenase n=6 Tax=Bacteroidales RepID=A6L9W7_PARD8
malate dehydrogenase
Malate dehydrogenase {ECO:0000313|EMBL:EFI09504.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_083_000G1_scaffold_1983_10
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11612..12766)
DNA (1155bp) protein (385aa)
Carboxymuconolactone decarboxylase n=2 Tax=Parabacteroides distasonis RepID=A6L9W8_PARD8
carboxymuconolactone decarboxylase
Uncharacterized protein {ECO:0000313|EMBL:EKN22819.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
L3_083_000G1_scaffold_1983_11
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12965..15457)
DNA (2493bp) protein (831aa)
Alanyl dipeptidyl peptidase n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IQ18_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KEJ87130.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
alanyl dipeptidyl peptidase
L3_083_000G1_scaffold_1983_12
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15469..16050)
DNA (582bp) protein (194aa)
Methyltransferase domain protein n=6 Tax=Bacteroidales RepID=C7X751_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ87129.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
methyltransferase
L3_083_000G1_scaffold_1983_13
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16047..16862)
DNA (816bp) protein (272aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=3 Tax=Bacteroidales RepID=ISPE_PARD8
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
L3_083_000G1_scaffold_1983_14
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17500..17886)
DNA (387bp) protein (129aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6AGX8_9PORP
Helix-turn-helix family protein {ECO:0000313|EMBL:KDS68477.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
transcriptional regulator
L3_083_000G1_scaffold_1983_15
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18189..18593
DNA (405bp) protein (135aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IQ22_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS51140.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
L3_083_000G1_scaffold_1983_16
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18742..20157)
DNA (1416bp) protein (472aa)
Transporter, major facilitator family protein n=7 Tax=Bacteroidales RepID=C7X755_9PORP
oxalate:formate antiporter
Putative uncharacterized protein {ECO:0000313|EMBL:EFI09511.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_083_000G1_scaffold_1983_17
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20181..21251)
DNA (1071bp) protein (357aa)
FolC protein n=1 Tax=Parabacteroides sp. D25 RepID=K6BVT2_9PORP
FolC protein {ECO:0000313|EMBL:EKN32348.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
folylpolyglutamate synthase
L3_083_000G1_scaffold_1983_18
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21251..21445)
DNA (195bp) protein (65aa)
Tetrahydrofolate synthase n=3 Tax=Bacteroidales RepID=D7IQ24_9BACE
folylpolyglutamate synthase
FolC protein {ECO:0000313|EMBL:EKN32682.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_083_000G1_scaffold_1983_19
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21529..21786
DNA (258bp) protein (86aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=A6LA18_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB49804.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
L3_083_000G1_scaffold_1983_20
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21776..22459)
DNA (684bp) protein (228aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6AGX5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN32350.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
two-component system response regulator
L3_083_000G1_scaffold_1983_21
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22484..24004)
DNA (1521bp) protein (507aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
Uncharacterized protein n=4 Tax=Bacteroidales RepID=K6A4B4_9PORP
two-component system sensor histidine kinase
L3_083_000G1_scaffold_1983_22
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24088..25704)
DNA (1617bp) protein (539aa)
Response regulator receiver domain protein n=4 Tax=Parabacteroides RepID=C7X760_9PORP
Two-component system sensor histidine kinase {ECO:0000313|EMBL:CDB49801.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
two-component hybrid sensor kinase/response regulator
L3_083_000G1_scaffold_1983_23
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25656..26345)
DNA (690bp) protein (230aa)
Hybrid sensory kinase n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IQ28_9BACE
Response regulator receiver domain protein {ECO:0000313|EMBL:EEU51918.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
two-component hybrid sensor kinase/response regulator
L3_083_000G1_scaffold_1983_24
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26441..27322)
DNA (882bp) protein (294aa)
Transcriptional regulator, AraC family n=6 Tax=Bacteroidales RepID=C7X761_9PORP
transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEU51919.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_083_000G1_scaffold_1983_25
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27422..28408)
DNA (987bp) protein (329aa)
Linear amide C-N hydrolase, choloylglycine hydrolase family protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0T9F4_9BACE
Choloylglycine hydrolase {ECO:0000313|EMBL:KEJ87117.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
choloylglycine hydrolase
L3_083_000G1_scaffold_1983_26
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28757..31123
DNA (2367bp) protein (789aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6A4B1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ87115.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L3_083_000G1_scaffold_1983_27
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31200..31811)
DNA (612bp) protein (204aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=A6LA25_PARD8
hypothetical protein
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
L3_083_000G1_scaffold_1983_28
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31980..32513
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6AGW7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ87112.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
L3_083_000G1_scaffold_1983_29
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32453..33211
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6A4A7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ87111.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
transposase
L3_083_000G1_scaffold_1983_30
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33393..34352)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6B456_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN22798.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
hypothetical protein
Displaying items 1-30 of 83 in total

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