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L3_083_000G1_scaffold_1986

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_000G1_scaffold_1986_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1..105
DNA (105bp) protein (35aa)
Uncharacterized protein n=3 Tax=Bifidobacterium breve RepID=U2CUJ1_BIFBR
Polyketide synthase regulator {ECO:0000313|EMBL:KEY32135.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
Transcriptional regulator
L3_083_000G1_scaffold_1986_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(321..674)
DNA (354bp) protein (118aa)
Transcriptional regulator, LacI family n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6DAX1_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:KEY32134.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
transcriptional regulator
L3_083_000G1_scaffold_1986_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(907..1875)
DNA (969bp) protein (323aa)
Transketolase, C-terminal domain protein n=2 Tax=Clostridium RepID=E9SNB3_CLOSY
Transketolase {ECO:0000313|EMBL:KEY32133.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
transketolase, alpha subunit
L3_083_000G1_scaffold_1986_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1957..2850)
DNA (894bp) protein (298aa)
Transketolase domain-containing protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GIY9_CLOSY
Transketolase {ECO:0000313|EMBL:KEY32132.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
Transketolase domain protein
L3_083_000G1_scaffold_1986_5
BJP_08E140C01_Coriobacteriales_62_12, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(2975..5365)
DNA (2391bp) protein (797aa)
ppdK; Pyruvate, phosphate dikinase (EC:2.7.9.1)
PREDICTED: LOW QUALITY PROTEIN: pyruvate, phosphate dikinase, chloroplastic-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1385D
Tax=BJP_08E140C01_Coriobacteriales_62_12
L3_083_000G1_scaffold_1986_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5821..7254)
DNA (1434bp) protein (478aa)
MFS transporter, probably Major myoinositol:H+ symporter, IolT n=1 Tax=Bifidobacterium asteroides (strain PRL2011) IPR7_BIFAP">RepID=K4IPR7_BIFAP
Uncharacterized protein {ECO:0000313|EMBL:KEY32130.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
MFS transporter, probably Major myoinositol:H+ symporter, IolT
L3_083_000G1_scaffold_1986_7
Bifidobacterium asteroides, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7475..7762
DNA (288bp) protein (96aa)
Antibiotic biosynthesis monooxygenase domain protein n=1 Tax=Pseudomonas fluorescens WH6 RepID=E2XM83_PSEFL
Uncharacterized protein {ECO:0000313|EMBL:KJY63824.1}; TaxID=1684 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium asteroides.;"
conserved hypothetical protein
L3_083_000G1_scaffold_1986_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7897..9297)
DNA (1401bp) protein (467aa)
MFS transporter, SP family n=1 Tax=Lactobacillus antri DSM 16041 RepID=C8P8N5_9LACO
Uncharacterized protein {ECO:0000313|EMBL:KEY32129.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
major facilitator transporter
L3_083_000G1_scaffold_1986_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9500..10387)
DNA (888bp) protein (296aa)
iolE; inosose dehydratase (EC:4.2.1.44)
Inosose dehydratase n=1 Tax=Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM 6432 / NBRC 12425 / NCIMB 8070) RepID=K7SPI8_PROA4
Inosose dehydratase {ECO:0000313|EMBL:KEY32128.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
L3_083_000G1_scaffold_1986_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10429..11460)
DNA (1032bp) protein (344aa)
Inositol 2-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01671, ECO:0000256|SAAS:SAAS00010088}; EC=1.1.1.18 {ECO:0000256|HAMAP-Rule:MF_01671, ECO:0000256|SAAS:SAAS00010088};; Myo-inositol 2-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01671}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase n=1 Tax=Lactobacillus plantarum (strain ATCC BAA-793 / NCIMB 8826 / WCFS1) RepID=IOLG_LACPL
inositol 2-dehydrogenase
L3_083_000G1_scaffold_1986_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11650..12657)
DNA (1008bp) protein (336aa)
Myo-inositol 2-dehydrogenase (Promiscuous) (Fragment) n=1 Tax=Lactobacillus plantarum 2025 RepID=U2J9M3_LACPN
Uncharacterized protein {ECO:0000313|EMBL:KEY32126.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
myo-inositol 2-dehydrogenase-like (promiscuous)
L3_083_000G1_scaffold_1986_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12980..14020
DNA (1041bp) protein (347aa)
Putative HTH-type transcriptional regulator n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2MXS4_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:KEY32125.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
transcriptional regulator
L3_083_000G1_scaffold_1986_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14240..15298)
DNA (1059bp) protein (353aa)
3-isopropylmalate dehydrogenase {ECO:0000313|EMBL:KEY32124.1}; EC=1.1.1.85 {ECO:0000313|EMBL:KEY32124.1};; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=1 Tax=Bifidobacterium thermophilum RBL67 RepID=M4RDQ6_9BIFI
L3_083_000G1_scaffold_1986_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15479..16246
DNA (768bp) protein (256aa)
Channel protein, MIP family n=3 Tax=Gardnerella vaginalis RepID=S4IBY6_GARVA
Glycerol uptake permease {ECO:0000313|EMBL:KEY32123.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
glpE; glycerol uptake facilitator protein
L3_083_000G1_scaffold_1986_15
Bifidobacterium asteroides, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16488..17249)
DNA (762bp) protein (254aa)
Transcriptional regulator, IclR family, C-terminal domain protein n=3 Tax=Bifidobacterium longum RepID=I3AUJ8_BIFLN
Transcriptional regulator {ECO:0000313|EMBL:KJY64098.1}; TaxID=1684 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium asteroides.;"
IclR-type transcriptional regulator
L3_083_000G1_scaffold_1986_16
Bifidobacterium asteroides, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17281..18276)
DNA (996bp) protein (332aa)
Transcriptional regulator IclR family C-terminal domain protein n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5NDG8_9BIFI
Regulatory protein, IclR {ECO:0000313|EMBL:KJY64099.1}; TaxID=1684 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium asteroides.;"
transcriptional regulator
L3_083_000G1_scaffold_1986_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18434..19897)
DNA (1464bp) protein (488aa)
aldehyde dehydrogenase n=1 Tax=Curtobacterium sp. B18 RepID=UPI00034851BF
Succinate-semialdehyde dehydrogenase {ECO:0000313|EMBL:KEY32122.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
aldehyde dehydrogenase
L3_083_000G1_scaffold_1986_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20055..21158)
DNA (1104bp) protein (368aa)
Zinc-binding dehydrogenase family protein n=2 Tax=Rhodococcus RepID=J2J2V4_9NOCA
Alcohol dehydrogenase {ECO:0000313|EMBL:KEY32121.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
zinc-containing alcohol dehydrogenase
L3_083_000G1_scaffold_1986_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21315..22190)
DNA (876bp) protein (292aa)
Uncharacterized enzyme involved in inositol metabolism n=1 Tax=Arthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG 23796 / Sphe3) RepID=F0M2B8_ARTPP
5-deoxyglucuronate isomerase {ECO:0000313|EMBL:KEY32120.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
myo-inositol catabolism IolB domain-containing protein
L3_083_000G1_scaffold_1986_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22497..24431
DNA (1935bp) protein (645aa)
iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase (EC:3.7.1.-)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00036BC62C
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase {ECO:0000313|EMBL:KEY32119.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
L3_083_000G1_scaffold_1986_21
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24575..24793)
DNA (219bp) protein (73aa)
Integrase core domain-containing protein n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5Y0P6_9BIFI
Integrase core domain-containing protein {ECO:0000313|EMBL:EFV36485.1}; Flags: Fragment;; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
transposase
Displaying 21 items

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