ggKbase home page

L3_083_000G1_scaffold_2443

Search features with annotation key words

Displaying items 1-30 of 91 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_000G1_scaffold_2443_1
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3..818
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6ISY3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB49564.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
hypothetical protein
L3_083_000G1_scaffold_2443_2
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

891..2105
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IGY9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ83364.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L3_083_000G1_scaffold_2443_3
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2110..2694
DNA (585bp) protein (195aa)
Galactoside O-acetyltransferase n=1 Tax=Bacteroides salanitronis (strain DSM 18170 / JCM 13567 / BL78) RepID=F0R0E6_BACSH
Bacterial transferase hexapeptide family protein {ECO:0000313|EMBL:KDS74320.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
galactoside O-acetyltransferase
L3_083_000G1_scaffold_2443_4
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2954..3361
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IW05_9PORP
Glycosyl transferase 11 family protein {ECO:0000313|EMBL:KDS74319.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
hypothetical protein
L3_083_000G1_scaffold_2443_5
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3377..4498
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IJY6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ83367.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
Glycosyltransferase
L3_083_000G1_scaffold_2443_6
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4741..5820
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6ISY0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB49559.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
group 1 glycosyl transferase
L3_083_000G1_scaffold_2443_7
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5827..6951
DNA (1125bp) protein (375aa)
putative phosphatidylinositol N-acetylglucosaminyltransferase (EC:2.4.1.198)
Putative phosphatidylinositol N-acetylglucosaminyltransferase n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IGY7_9PORP
Glycosyl transferases group 1 family protein {ECO:0000313|EMBL:KDS65276.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_083_000G1_scaffold_2443_8
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6964..8094
DNA (1131bp) protein (377aa)
Glycosyl transferase group 1 n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6JHL2_9PORP
Glycosyl transferase group 1 {ECO:0000313|EMBL:CDB49557.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
group 1 glycosyl transferase
L3_083_000G1_scaffold_2443_9
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8234..9379
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IW00_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB49556.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
hypothetical protein
L3_083_000G1_scaffold_2443_10
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9424..10410
DNA (987bp) protein (329aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IJY3_9PORP
Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus family protein {ECO:0000313|EMBL:KDS65269.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
4Fe-4S ferredoxin
L3_083_000G1_scaffold_2443_11
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10417..10959
DNA (543bp) protein (181aa)
Putative acetyltransferase n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6ISX7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ83375.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
acetyltransferase
L3_083_000G1_scaffold_2443_12
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10963..11772
DNA (810bp) protein (270aa)
Putative transferase n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IGY2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ83376.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
family 2 glycosyl transferase
L3_083_000G1_scaffold_2443_13
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11778..13457
DNA (1680bp) protein (560aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6JHL0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ83377.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L3_083_000G1_scaffold_2443_14
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13447..14235
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IVZ6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ83378.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L3_083_000G1_scaffold_2443_15
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14259..15455
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IJX8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ83379.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L3_083_000G1_scaffold_2443_16
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15492..16610
DNA (1119bp) protein (373aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
GDP-mannose 4,6-dehydratase n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6ISX2_9PORP
GDP-mannose 4,6-dehydratase
L3_083_000G1_scaffold_2443_17
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16610..17692
DNA (1083bp) protein (361aa)
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
GDP-L-fucose synthase n=3 Tax=Parabacteroides RepID=C7XF00_9PORP
GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase
L3_083_000G1_scaffold_2443_18
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17793..18818)
DNA (1026bp) protein (342aa)
Glycosyltransferase family 2 n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6JHK4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ83382.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
glycosyl transferase family protein
L3_083_000G1_scaffold_2443_19
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18815..19705)
DNA (891bp) protein (297aa)
Lipid A biosynthesis (KDO)2-(Lauroyl)-lipid IVA acyltransferase n=4 Tax=Parabacteroides RepID=C7XF04_9PORP
Lipid A biosynthesis lauroyl acyltransferase {ECO:0000313|EMBL:KEJ83383.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
acetyltransferase
L3_083_000G1_scaffold_2443_20
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19707..21041)
DNA (1335bp) protein (445aa)
tRNA methylthiotransferase YqeV n=3 Tax=Parabacteroides RepID=C7XF05_9PORP
tRNA methylthiotransferase YqeV {ECO:0000313|EMBL:EFK63640.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
Fe-S oxidoreductase
L3_083_000G1_scaffold_2443_21
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21696..23411)
DNA (1716bp) protein (572aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6A8V9_9PORP
Hexosaminidase {ECO:0000313|EMBL:KEJ83386.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
beta-N-acetylhexosaminidase
L3_083_000G1_scaffold_2443_22
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23494..25158
DNA (1665bp) protein (555aa)
AMP-binding enzyme n=6 Tax=Bacteroidales RepID=C7XF08_9PORP
AMP-binding enzyme {ECO:0000313|EMBL:EFK63643.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
long-chain-fatty-acid-CoA ligase
L3_083_000G1_scaffold_2443_23
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25324..25539
DNA (216bp) protein (72aa)
Uncharacterized protein n=8 Tax=Bacteroidales RepID=C7XF09_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EFK63644.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
L3_083_000G1_scaffold_2443_24
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25621..27660
DNA (2040bp) protein (680aa)
TonB-dependent receptor n=1 Tax=Parabacteroides sp. D13 RepID=C7XF10_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ83389.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
TonB-dependent receptor
L3_083_000G1_scaffold_2443_25
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27655..28965)
DNA (1311bp) protein (437aa)
Pyridine nucleotide-disulfide oxidoreductase family protein n=3 Tax=Bacteroidales RepID=D7IWQ3_9BACE
NADH dehydrogenase
Pyridine nucleotide-disulfide oxidoreductase family protein {ECO:0000313|EMBL:EFI07056.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_083_000G1_scaffold_2443_26
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29052..29276)
DNA (225bp) protein (75aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=K6A8W3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN26730.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_083_000G1_scaffold_2443_27
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29410..30300)
DNA (891bp) protein (297aa)
Transcriptional regulator n=7 Tax=Bacteroidales RepID=A6L836_PARD8
transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEU49459.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_083_000G1_scaffold_2443_28
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30548..31969)
DNA (1422bp) protein (474aa)
Sialic acid-specific 9-O-acetylesterase n=5 Tax=Bacteroidales RepID=A6L837_PARD8
Sialate O-acetylesterase {ECO:0000313|EMBL:KEJ83392.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
sialic acid-specific 9-O-acetylesterase
L3_083_000G1_scaffold_2443_29
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32051..33250)
DNA (1200bp) protein (400aa)
Cellobiose 2-epimerase {ECO:0000256|HAMAP-Rule:MF_00929}; Short=CE {ECO:0000256|HAMAP-Rule:MF_00929};; EC=5.1.3.11 {ECO:0000256|HAMAP-Rule:MF_00929};; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
Cellobiose 2-epimerase n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TK25_9BACE
N-acyl-D-glucosamine 2-epimerase
L3_083_000G1_scaffold_2443_30
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33243..34634)
DNA (1392bp) protein (464aa)
Sugar (Glycoside-Pentoside-Hexuronide) transporter n=4 Tax=Parabacteroides RepID=K6B8R7_9PORP
GPH family glycoside/pentoside/hexuronide:cation symporter {ECO:0000313|EMBL:KEJ83394.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
cation symporter
Displaying items 1-30 of 91 in total

View Taxonomy