ggKbase home page

L3_083_000G1_scaffold_2566

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_000G1_scaffold_2566_1
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2..394
DNA (393bp) protein (131aa)
DegT/DnrJ/EryC1/StrS aminotransferase family protein n=2 Tax=Parabacteroides RepID=C7X5W8_9PORP
DegT/DnrJ/EryC1/StrS aminotransferase family protein {ECO:0000313|EMBL:EEU53288.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
aminotransferase
L3_083_000G1_scaffold_2566_2
unknown

Not on your lists

comp(300..494)
DNA (195bp) protein (65aa)

This feature has no annotations

L3_083_000G1_scaffold_2566_3
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

805..1047
DNA (243bp) protein (81aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=A6LI26_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS71441.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_083_000G1_scaffold_2566_4
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1044..1454
DNA (411bp) protein (137aa)
PIN domain protein n=5 Tax=Bacteroidales RepID=C7X5X0_9PORP
DNA binding protein
PIN domain protein {ECO:0000313|EMBL:EEU53290.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_083_000G1_scaffold_2566_5
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1884..3887
DNA (2004bp) protein (668aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632};; Imidazolonepropionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00577}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
urocanate hydratase (EC:4.2.1.49)
Urocanate hydratase n=1 Tax=Parabacteroides sp. D25 RepID=K5ZLX2_9PORP
L3_083_000G1_scaffold_2566_6
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3884..4789
DNA (906bp) protein (302aa)
Glutamate formimidoyltransferase {ECO:0000313|EMBL:EEY83305.1}; EC=2.1.2.5 {ECO:0000313|EMBL:EEY83305.1};; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
Glutamate formimidoyltransferase n=2 Tax=Bacteroidales RepID=D0TDD0_9BACE
formiminotransferase-cyclodeaminase
L3_083_000G1_scaffold_2566_7
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4793..6517
DNA (1725bp) protein (575aa)
Imidazolonepropionase {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112}; EC=3.5.2.7 {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112};; Imidazolone-5-propionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00372}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
Imidazolonepropionase n=6 Tax=Bacteroidales RepID=HUTI_PARD8
imidazolonepropionase
L3_083_000G1_scaffold_2566_8
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6521..7102
DNA (582bp) protein (194aa)
Histidine ammonia-lyase {ECO:0000256|RuleBase:RU004479, ECO:0000256|SAAS:SAAS00083026}; EC=4.3.1.3 {ECO:0000256|RuleBase:RU004479, ECO:0000256|SAAS:SAAS00083026};; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
Histidine ammonia-lyase n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IR18_9PORP
histidine ammonia-lyase
L3_083_000G1_scaffold_2566_9
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7056..7952
DNA (897bp) protein (299aa)
Histidine ammonia-lyase {ECO:0000256|RuleBase:RU004479, ECO:0000256|SAAS:SAAS00083026}; EC=4.3.1.3 {ECO:0000256|RuleBase:RU004479, ECO:0000256|SAAS:SAAS00083026};; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
Histidine ammonia-lyase n=3 Tax=Bacteroidales RepID=C7X5X5_9PORP
histidine ammonia-lyase
L3_083_000G1_scaffold_2566_10
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8052..9206
DNA (1155bp) protein (385aa)
Uncharacterized protein n=6 Tax=Bacteroidales RepID=A6LI33_PARD8
hypothetical protein
Acyltransferase family protein {ECO:0000313|EMBL:KDS52623.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
L3_083_000G1_scaffold_2566_11
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9324..10433)
DNA (1110bp) protein (370aa)
Mrp/Nbp35 family ATP-binding protein n=8 Tax=Bacteroidales RepID=A6LI34_PARD8
Mrp/Nbp35 family ATP-binding protein
Uncharacterized protein {ECO:0000313|EMBL:EKN21703.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_083_000G1_scaffold_2566_12
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10462..11220)
DNA (759bp) protein (253aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
trmB; tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase n=4 Tax=Bacteroidales RepID=C7X5X9_9PORP
L3_083_000G1_scaffold_2566_13
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11366..13219
DNA (1854bp) protein (618aa)
Glycosyltransferase family 2 n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LI36_PARD8
glycosyl transferase family protein
Glycosyltransferase family 2 {ECO:0000313|EMBL:ABR45350.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_083_000G1_scaffold_2566_14
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13708..14685
DNA (978bp) protein (326aa)
Kinase, PfkB family n=1 Tax=Parabacteroides sp. D13 RepID=C7X5Y1_9PORP
PfkB carbohydrate kinase family protein {ECO:0000313|EMBL:KDS71454.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
PfkB family carbohydrate kinase
L3_083_000G1_scaffold_2566_15
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14734..16440
DNA (1707bp) protein (569aa)
C-terminal processing peptidase family protein {ECO:0000313|EMBL:KDS71455.1}; EC=3.4.21.- {ECO:0000313|EMBL:KDS71455.1};; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
Carboxy-terminal processing protease n=4 Tax=Bacteroidales RepID=A6LI38_PARD8
carboxy-terminal processing protease
L3_083_000G1_scaffold_2566_16
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16511..17689)
DNA (1179bp) protein (393aa)
Ser/Thr protein phosphatase family protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IU32_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ85271.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
phosphoesterase
L3_083_000G1_scaffold_2566_17
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17692..18786)
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6AWN7_9PORP
Calcineurin-like phosphoesterase family protein {ECO:0000313|EMBL:KDS71457.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
hypothetical protein
L3_083_000G1_scaffold_2566_18
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19054..19746)
DNA (693bp) protein (231aa)
Two-component system response regulator n=4 Tax=Bacteroidales RepID=D7IMQ7_9BACE
two-component system response regulator
Two-component system response regulator {ECO:0000313|EMBL:EFI10634.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_083_000G1_scaffold_2566_19
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19753..21129)
DNA (1377bp) protein (459aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
Two-component system sensor histidine kinase n=2 Tax=Bacteroidales RepID=A6LI42_PARD8
two-component system sensor histidine kinase
L3_083_000G1_scaffold_2566_20
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21290..21436
DNA (147bp) protein (49aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=C7X5Y7_9PORP
Putative uncharacterized protein {ECO:0000313|EMBL:EFI10636.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_083_000G1_scaffold_2566_21
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21500..21688
DNA (189bp) protein (63aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=C7X5Y8_9PORP
Hyphally-regulated protein {ECO:0000313|EMBL:EFI10637.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_083_000G1_scaffold_2566_22
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21773..23071
DNA (1299bp) protein (433aa)
Radical SAM domain-containing protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IMR1_9BACE
Radical SAM domain-containing protein {ECO:0000313|EMBL:EFI10638.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
transcriptional regulator
L3_083_000G1_scaffold_2566_23
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23076..25355
DNA (2280bp) protein (760aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IMR2_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI10639.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_083_000G1_scaffold_2566_24
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25385..27556
DNA (2172bp) protein (724aa)
ABC transporter ATP-binding protein n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LI45_PARD8
Uncharacterized protein {ECO:0000313|EMBL:KEJ85281.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
ABC transporter ATP-binding protein
L3_083_000G1_scaffold_2566_25
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27561..27749
DNA (189bp) protein (63aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=K5Z2S3_9PORP
Putative uncharacterized protein {ECO:0000313|EMBL:EFI10641.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_083_000G1_scaffold_2566_26
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27802..28236
DNA (435bp) protein (145aa)
Toxin-antitoxin system antitoxin component n=2 Tax=Bacteroidales RepID=D7IMR5_9BACE
Toxin-antitoxin system antitoxin component {ECO:0000313|EMBL:EFI10642.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_083_000G1_scaffold_2566_27
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28245..28568
DNA (324bp) protein (108aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K6ABW5_9PORP
nucleotidyltransferase
Nucleotidyltransferase domain protein {ECO:0000313|EMBL:KDS64555.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_083_000G1_scaffold_2566_28
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28622..29263)
DNA (642bp) protein (214aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=A6LI48_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR45362.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_083_000G1_scaffold_2566_29
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29510..31774
DNA (2265bp) protein (755aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=K6AJL6_9PORP
TonB-dependent receptor
TonB-dependent receptor exported protein {ECO:0000313|EMBL:EFI10644.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_083_000G1_scaffold_2566_30
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31899..32666
DNA (768bp) protein (256aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IMR8_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI10645.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
Displaying items 1-30 of 33 in total

View Taxonomy