ggKbase home page

L3_083_000G1_scaffold_2800

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_000G1_scaffold_2800_1
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1..1680)
DNA (1680bp) protein (560aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=A6LDR3_PARD8
Peptidase, M23 family {ECO:0000313|EMBL:EEU50431.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
hypothetical protein
L3_083_000G1_scaffold_2800_2
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1768..2412)
DNA (645bp) protein (215aa)
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000256|HAMAP-Rule:MF_01629};; PNP/PMP oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; Pyridoxal 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_01629}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
Pyridoxine/pyridoxamine 5'-phosphate oxidase n=2 Tax=Parabacteroides RepID=A6LDR2_PARD8
pyridoxamine 5'-phosphate oxidase
L3_083_000G1_scaffold_2800_3
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2500..3546)
DNA (1047bp) protein (349aa)
Uncharacterized protein n=5 Tax=Parabacteroides RepID=A6LDR1_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKN31021.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
L3_083_000G1_scaffold_2800_4
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3586..5073)
DNA (1488bp) protein (496aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=A6LDR0_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR43824.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_083_000G1_scaffold_2800_5
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5223..6680)
DNA (1458bp) protein (486aa)
Aminoacyl-histidine dipeptidase n=3 Tax=Parabacteroides RepID=A6LDQ9_PARD8
aminoacyl-histidine dipeptidase
Aminoacyl-histidine dipeptidase {ECO:0000313|EMBL:ABR43823.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_083_000G1_scaffold_2800_6
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6828..7046
DNA (219bp) protein (73aa)
Uncharacterized protein n=8 Tax=Bacteroidales RepID=C7XC86_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN28681.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_083_000G1_scaffold_2800_7
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7072..7677
DNA (606bp) protein (202aa)
Uncharacterized protein n=9 Tax=Bacteroidales RepID=A6LDQ8_PARD8
hypothetical protein
Outer membrane family protein {ECO:0000313|EMBL:KDS64280.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_083_000G1_scaffold_2800_8
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7861..8184)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LDQ7_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR43821.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_083_000G1_scaffold_2800_9
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8185..8490)
DNA (306bp) protein (102aa)
Uncharacterized protein n=9 Tax=Bacteroidales RepID=A6LDQ6_PARD8
septum formation initiator-like protein
Septum formation initiator family protein {ECO:0000313|EMBL:KDS64286.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_083_000G1_scaffold_2800_10
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8560..10320
DNA (1761bp) protein (587aa)
DNA polymerase III, subunit gamma and tau {ECO:0000313|EMBL:EEU50440.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EEU50440.1};; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
DNA polymerase III subunit gamma/tau n=3 Tax=Parabacteroides RepID=A6LDQ5_PARD8
DNA polymerase III subunit gamma/tau
L3_083_000G1_scaffold_2800_11
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10366..11802)
DNA (1437bp) protein (479aa)
Aldehyde dehydrogenase A n=2 Tax=Parabacteroides RepID=A6LDQ4_PARD8
aldehyde dehydrogenase
Lactaldehyde dehydrogenase/glycolaldehyde dehydrogenase {ECO:0000313|EMBL:KEJ84349.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
L3_083_000G1_scaffold_2800_12
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11992..12831)
DNA (840bp) protein (280aa)
Nicotinate-nucleotide pyrophosphorylase n=2 Tax=Parabacteroides RepID=A6LDQ3_PARD8
nicotinate-nucleotide pyrophosphorylase
Nicotinate-nucleotide diphosphorylase (Carboxylating) {ECO:0000313|EMBL:KEJ84350.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
L3_083_000G1_scaffold_2800_13
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12835..13206)
DNA (372bp) protein (124aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=A6LDQ2_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKN31031.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
L3_083_000G1_scaffold_2800_14
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13295..13768
DNA (474bp) protein (158aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
Ribosomal RNA large subunit methyltransferase H n=7 Tax=Bacteroidales RepID=RLMH_PARD8
rRNA large subunit methyltransferase
L3_083_000G1_scaffold_2800_15
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13876..14196)
DNA (321bp) protein (107aa)
Multidrug resistance protein, SMR family n=9 Tax=Bacteroidales RepID=C7XC95_9PORP
multidrug resistance protein
Small Multidrug Resistance family protein {ECO:0000313|EMBL:KDS64284.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_083_000G1_scaffold_2800_16
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14209..15285)
DNA (1077bp) protein (359aa)
chorismate synthase (EC:4.2.3.5)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
Chorismate synthase n=5 Tax=Bacteroidales RepID=AROC_PARD8
L3_083_000G1_scaffold_2800_17
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15441..15890)
DNA (450bp) protein (150aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
Peptidyl-prolyl cis-trans isomerase n=9 Tax=Bacteroidales RepID=A6LDP8_PARD8
peptidyl-prolyl cis-trans isomerase SlyD
L3_083_000G1_scaffold_2800_18
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15939..16718)
DNA (780bp) protein (260aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K6B4L2_9PORP
Cystathione beta-lyase {ECO:0000313|EMBL:KEJ84356.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
aminotransferase
Displaying 18 items

View Taxonomy