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L3_083_000G1_scaffold_2859

Search features with annotation key words

Displaying items 1-30 of 99 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_000G1_scaffold_2859_1
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3..311)
DNA (309bp) protein (103aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
Carbamoyl-phosphate synthase, large subunit n=3 Tax=Bacteroidales RepID=D0TDW9_9BACE
glutamine-dependent carbamyl phosphate synthetase
L3_083_000G1_scaffold_2859_2
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(660..2951)
DNA (2292bp) protein (764aa)
Peptidase families S8 and S53 subfamily n=3 Tax=Bacteroidales RepID=D7IM14_9BACE
Putative calcium dependent protease {ECO:0000313|EMBL:ABR45128.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
calcium dependent protease
L3_083_000G1_scaffold_2859_3
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2948..3364)
DNA (417bp) protein (139aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=A6LHG5_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEU53064.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_083_000G1_scaffold_2859_4
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3724..4116
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TDW8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KEJ85031.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
Predicted AAA-ATPase.
L3_083_000G1_scaffold_2859_5
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4154..5443
DNA (1290bp) protein (430aa)
Uncharacterized protein (Fragment) n=1 Tax=Parabacteroides sp. D13 RepID=C7X595_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ85032.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L3_083_000G1_scaffold_2859_6
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5615..5971)
DNA (357bp) protein (119aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IM16_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI10393.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_083_000G1_scaffold_2859_7
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6016..6777)
DNA (762bp) protein (254aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IM17_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KEJ85034.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L3_083_000G1_scaffold_2859_8
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6743..7288)
DNA (546bp) protein (182aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IM17_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEU53067.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
hypothetical protein
L3_083_000G1_scaffold_2859_9
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7341..10427)
DNA (3087bp) protein (1029aa)
Drug efflux protein n=2 Tax=Parabacteroides RepID=A6LHH1_PARD8
Uncharacterized protein {ECO:0000313|EMBL:KEJ85035.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
drug efflux protein
L3_083_000G1_scaffold_2859_10
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10561..12054)
DNA (1494bp) protein (498aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K6A9Z3_9PORP
outer membrane protein TolC
Putative outer membrane protein TolC {ECO:0000313|EMBL:ABR45136.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_083_000G1_scaffold_2859_11
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12051..15116)
DNA (3066bp) protein (1022aa)
Putative cation efflux system protein n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LHH3_PARD8
Putative cation efflux system protein {ECO:0000313|EMBL:ABR45137.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
cation efflux system protein
L3_083_000G1_scaffold_2859_12
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15151..16155)
DNA (1005bp) protein (335aa)
Efflux transporter, RND family, MFP subunit n=2 Tax=Parabacteroides distasonis RepID=K6AXE0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ85038.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
cation efflux system protein
L3_083_000G1_scaffold_2859_13
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16256..18064)
DNA (1809bp) protein (603aa)
Tetratricopeptide repeat protein n=1 Tax=Parabacteroides sp. D13 RepID=C7X5A2_9PORP
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EEU53072.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
hypothetical protein
L3_083_000G1_scaffold_2859_14
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18067..19476)
DNA (1410bp) protein (470aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IM23_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI10400.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_083_000G1_scaffold_2859_15
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19483..20343)
DNA (861bp) protein (287aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
Signal peptidase I n=5 Tax=Bacteroidales RepID=A6LHH7_PARD8
signal peptidase I
L3_083_000G1_scaffold_2859_16
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20439..21491)
DNA (1053bp) protein (351aa)
Uncharacterized protein n=7 Tax=Bacteroidales RepID=A6LHH8_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEU53075.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_083_000G1_scaffold_2859_17
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21679..21909)
DNA (231bp) protein (77aa)
Uncharacterized protein n=6 Tax=Bacteroidales RepID=C7X5A7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EFK64137.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_083_000G1_scaffold_2859_18
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22116..22970)
DNA (855bp) protein (285aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=A6LHI0_PARD8
Uncharacterized protein {ECO:0000313|EMBL:KEJ85045.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L3_083_000G1_scaffold_2859_19
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22983..24032)
DNA (1050bp) protein (350aa)
Putative lipoprotein n=2 Tax=Bacteroidales RepID=A6LHI1_PARD8
Uncharacterized protein {ECO:0000313|EMBL:KEJ85046.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
lipoprotein
L3_083_000G1_scaffold_2859_20
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24041..24259)
DNA (219bp) protein (73aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=E1YP91_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN22298.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_083_000G1_scaffold_2859_21
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24413..25453
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IWF3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB50749.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
hypothetical protein
L3_083_000G1_scaffold_2859_22
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25486..25740)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6JL31_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB50747.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
L3_083_000G1_scaffold_2859_23
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26324..27526
DNA (1203bp) protein (401aa)
Uncharacterized protein n=6 Tax=Bacteroidales RepID=A6LHI5_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK64144.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_083_000G1_scaffold_2859_24
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27534..28757)
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6B720_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN31881.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L3_083_000G1_scaffold_2859_25
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28939..29334
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9J2X6_BACVU
Uncharacterized protein {ECO:0000313|EMBL:KEJ85055.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
Fic family protein
L3_083_000G1_scaffold_2859_26
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29603..30556)
DNA (954bp) protein (318aa)
Membrane protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IM34_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KEJ85056.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
integral membrane protein
L3_083_000G1_scaffold_2859_27
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30656..30958
DNA (303bp) protein (101aa)
PAAR repeat-containing protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IM35_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KEJ85057.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L3_083_000G1_scaffold_2859_28
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31041..32093
DNA (1053bp) protein (351aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
Tryptophan--tRNA ligase n=4 Tax=Bacteroidales RepID=A6LHJ0_PARD8
L3_083_000G1_scaffold_2859_29
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32243..32755
DNA (513bp) protein (171aa)
RNA polymerase sigma-70 factor n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TDU5_9BACE
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EEY83470.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
RNA polymerase ECF-type sigma factor
L3_083_000G1_scaffold_2859_30
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32844..33653
DNA (810bp) protein (270aa)
Uncharacterized protein n=2 Tax=Parabacteroides distasonis RepID=A6LHJ2_PARD8
hypothetical protein
Outer membrane insertion C-terminal signal domain protein {ECO:0000313|EMBL:KDS57399.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
Displaying items 1-30 of 99 in total

View Taxonomy