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L3_083_000G1_scaffold_2977

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Displaying items 1-30 of 126 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_000G1_scaffold_2977_1
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3..1919)
DNA (1917bp) protein (639aa)
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
DNA-directed RNA polymerase subunit beta n=11 Tax=Bacteroidales RepID=RPOB_PARD8
L3_083_000G1_scaffold_2977_2
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2027..2404)
DNA (378bp) protein (126aa)
50S ribosomal protein L7/L12 n=8 Tax=Bacteroidales RepID=C7XBV1_9PORP
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
rplL; 50S ribosomal protein L7/L12
L3_083_000G1_scaffold_2977_3
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2455..2985)
DNA (531bp) protein (177aa)
Ribosomal protein L10 n=4 Tax=Bacteroidales RepID=D0THH5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKN23765.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
rplJ; 50S ribosomal protein L10
L3_083_000G1_scaffold_2977_4
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3000..3671)
DNA (672bp) protein (224aa)
50S ribosomal protein L1 n=8 Tax=Bacteroidales RepID=RL1_PARD8
rplA; 50S ribosomal protein L1
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_083_000G1_scaffold_2977_5
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3652..4095)
DNA (444bp) protein (148aa)
50S ribosomal protein L11 n=5 Tax=Bacteroidales RepID=D0THH7_9BACE
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
rplK; 50S ribosomal protein L11
L3_083_000G1_scaffold_2977_6
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4163..4705)
DNA (543bp) protein (181aa)
Transcription termination/antitermination protein NusG n=9 Tax=Bacteroidales RepID=A6LE86_PARD8
transcription anti-termination protein
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_083_000G1_scaffold_2977_7
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4717..4911)
DNA (195bp) protein (65aa)
Protein translocase subunit SecE n=9 Tax=Bacteroidales RepID=A6LE87_PARD8
preprotein translocase subunit SecE
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_083_000G1_scaffold_2977_8
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5055..6242)
DNA (1188bp) protein (396aa)
tuf; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu n=8 Tax=Bacteroidales RepID=EFTU_PARD8
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_083_000G1_scaffold_2977_9
Bacteroides dorei CAG:222, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6364..6522)
DNA (159bp) protein (53aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I9QN01_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB36905.1}; TaxID=1263042 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides dorei CAG:222.;"
L3_083_000G1_scaffold_2977_10
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6707..7042)
DNA (336bp) protein (112aa)
Sigma-54 modulation protein n=9 Tax=Bacteroidales RepID=A6LE89_PARD8
Ribosomal subunit interface protein {ECO:0000313|EMBL:EEY82585.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
sigma-54 modulation protein
L3_083_000G1_scaffold_2977_11
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6996..7904)
DNA (909bp) protein (303aa)
Tyrosine recombinase XerC n=5 Tax=Parabacteroides RepID=A6LE90_PARD8
tyrosine type site-specific recombinase
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_083_000G1_scaffold_2977_12
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7978..8169)
DNA (192bp) protein (64aa)
30S ribosomal protein S21 n=9 Tax=Bacteroidales RepID=RS21_PARD8
rpsU; 30S ribosomal protein S21
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_083_000G1_scaffold_2977_13
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8254..9291)
DNA (1038bp) protein (346aa)
Methylthioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; Short=M1Pi {ECO:0000256|HAMAP-Rule:MF_01678};; Short=MTR-1-P isomerase {ECO:0000256|HAMAP-Rule:MF_01678};; EC=5.3.1.23 {ECO:0000256|HAMAP-Rule:MF_01678};; S-methyl-5-thioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
Methylthioribose-1-phosphate isomerase n=2 Tax=Parabacteroides RepID=K5ZDC7_9PORP
mtnA; methylthioribose-1-phosphate isomerase
L3_083_000G1_scaffold_2977_14
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9306..10163)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6BRM5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN30798.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L3_083_000G1_scaffold_2977_15
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10651..11127
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LE94_PARD8
hypothetical protein
Bacterial DNA-binding family protein {ECO:0000313|EMBL:KDS58376.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_083_000G1_scaffold_2977_16
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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11172..12959
DNA (1788bp) protein (596aa)
Putative aminopeptidase n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LE95_PARD8
aminopeptidase
Xaa-Pro aminopeptidase {ECO:0000313|EMBL:KEJ84224.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
L3_083_000G1_scaffold_2977_17
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12970..13485
DNA (516bp) protein (172aa)
Acetyltransferase n=9 Tax=Bacteroidales RepID=A6LE96_PARD8
acetyltransferase
Bacterial transferase hexapeptide repeat protein {ECO:0000313|EMBL:EEY82592.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
L3_083_000G1_scaffold_2977_18
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13556..14749
DNA (1194bp) protein (398aa)
Putative beta-lactamase n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LE97_PARD8
beta-lactamase
Uncharacterized protein {ECO:0000313|EMBL:KEJ84222.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
L3_083_000G1_scaffold_2977_19
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14786..15829
DNA (1044bp) protein (348aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IRJ7_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR44012.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_083_000G1_scaffold_2977_20
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15857..17260
DNA (1404bp) protein (468aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K5ZV10_9PORP
Putative aminopeptidase E {ECO:0000313|EMBL:EEU50284.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
aminopeptidase
L3_083_000G1_scaffold_2977_21
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17395..18555)
DNA (1161bp) protein (387aa)
Glycosyltransferase family 30 n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LEA0_PARD8
3-deoxy-D-manno-octulosonic-acid transferase {ECO:0000313|EMBL:KEJ84219.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
glycosyl transferase family protein
L3_083_000G1_scaffold_2977_22
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18633..20150)
DNA (1518bp) protein (506aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase n=3 Tax=Parabacteroides RepID=C7XBT2_9PORP
L3_083_000G1_scaffold_2977_23
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20246..22285
DNA (2040bp) protein (680aa)
7TM receptor with intracellular HD hydrolase n=2 Tax=Parabacteroides RepID=C7XBT1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN30789.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
membrane-associated HD superfamily hydrolase
L3_083_000G1_scaffold_2977_24
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22295..23476
DNA (1182bp) protein (394aa)
Transcriptional regulator, AraC family n=5 Tax=Bacteroidales RepID=D0THJ5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KEJ84215.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
transcriptional regulator
L3_083_000G1_scaffold_2977_25
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23483..23878)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K6A6S1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ84214.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
PIN domain-containing protein
L3_083_000G1_scaffold_2977_26
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23841..24068)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K5YYI4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ84213.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L3_083_000G1_scaffold_2977_27
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24208..24969
DNA (762bp) protein (254aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=A6LEA4_PARD8
Uncharacterized protein {ECO:0000313|EMBL:KEJ84212.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L3_083_000G1_scaffold_2977_28
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25186..27888
DNA (2703bp) protein (901aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D13 RepID=C7XBS8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ84211.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L3_083_000G1_scaffold_2977_29
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27928..30069
DNA (2142bp) protein (714aa)
Repeat protein n=1 Tax=Parabacteroides sp. D13 RepID=C7XBS7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ84210.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L3_083_000G1_scaffold_2977_30
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30366..30611
DNA (246bp) protein (82aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6ARZ6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB50250.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
hypothetical protein
Displaying items 1-30 of 126 in total

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