ggKbase home page

L3_083_000G1_scaffold_22

Search features with annotation key words

Displaying items 1-30 of 204 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_000G1_scaffold_22_1
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

158..784
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LSI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO54250.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
hypothetical protein
L3_083_000G1_scaffold_22_2
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

935..2530
DNA (1596bp) protein (532aa)
Hydroxylamine reductase {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00038686}; EC=1.7.99.1 {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00150119};; Hybrid-cluster protein {ECO:0000256|HAMAP-Rule:MF_00069}; Prismane protein {ECO:0000256|HAMAP-Rule:MF_00069}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Hydroxylamine reductase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NAZ5_9FIRM
hybrid cluster protein
L3_083_000G1_scaffold_22_3
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2527..3933)
DNA (1407bp) protein (469aa)
MATE efflux family protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N785_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CDF09249.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
multidrug resistance protein, MATE family
L3_083_000G1_scaffold_22_4
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4194..5549
DNA (1356bp) protein (452aa)
Putative efflux protein MATE family n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N966_9FIRM
Putative efflux protein MATE family {ECO:0000313|EMBL:CDF09250.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
putative efflux protein, MATE family
L3_083_000G1_scaffold_22_5
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5612..6055
DNA (444bp) protein (148aa)
Transcriptional regulator Rrf2 family n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N9K9_9FIRM
Transcriptional regulator Rrf2 family {ECO:0000313|EMBL:CDF09251.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
transcriptional regulator, BadM/Rrf2 family
L3_083_000G1_scaffold_22_6
Eubacterium sp. CAG:252, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6136..6885
DNA (750bp) protein (250aa)
Iron-regulated ABC transporter ATPase subunit SufC n=1 Tax=Eubacterium sp. CAG:252 RepID=R6K4T8_9FIRM
Iron-regulated ABC transporter ATPase subunit SufC {ECO:0000313|EMBL:CDB68435.1}; TaxID=1262887 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:252.;"
Iron-regulated ABC transporter ATPase subunit SufC
L3_083_000G1_scaffold_22_7
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6933..8339
DNA (1407bp) protein (469aa)
FeS assembly protein SufB n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NAZ8_9FIRM
FeS assembly protein SufB {ECO:0000313|EMBL:CDF09253.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Iron-regulated ABC transporter membrane component SufB
L3_083_000G1_scaffold_22_8
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8375..9442
DNA (1068bp) protein (356aa)
SufB/sufD domain protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N793_9FIRM
SufB/sufD domain protein {ECO:0000313|EMBL:CDF09254.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
ABC-type transport system involved in Fe-S cluster assembly, permease component
L3_083_000G1_scaffold_22_9
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9454..10680
DNA (1227bp) protein (409aa)
Cysteine desulfurase {ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|SAAS:SAAS00062216};; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
cysteine desulfurase (EC:2.8.1.7 4.4.1.16)
Cysteine desulfurase SufS subfamily n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N969_9FIRM
L3_083_000G1_scaffold_22_10
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10670..11095
DNA (426bp) protein (142aa)
SUF system FeS assembly protein NifU family n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N9L3_9FIRM
SUF system FeS assembly protein NifU family {ECO:0000313|EMBL:CDF09256.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
SUF system FeS assembly protein, NifU family
L3_083_000G1_scaffold_22_11
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11097..12590
DNA (1494bp) protein (498aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Glycerol kinase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NAY2_9FIRM
glycerol kinase
L3_083_000G1_scaffold_22_12
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12675..13625
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NB01_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF09258.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
hypothetical protein
L3_083_000G1_scaffold_22_13
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13625..14695
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N796_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF09259.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
hypothetical protein
L3_083_000G1_scaffold_22_14
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14676..17003
DNA (2328bp) protein (776aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N973_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF09260.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Transglutaminase-like enzymes, putative cysteine proteases
L3_083_000G1_scaffold_22_15
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17071..17997
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N9L7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF09261.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Predicted permeases
L3_083_000G1_scaffold_22_16
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18196..19524
DNA (1329bp) protein (443aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NAY6_9FIRM
2-alkenal reductase
L3_083_000G1_scaffold_22_17
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19595..20143
DNA (549bp) protein (183aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NB06_9FIRM
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:CDF09263.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
L3_083_000G1_scaffold_22_18
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20360..20824
DNA (465bp) protein (155aa)
Competence/damage-inducible protein CinA n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N799_9FIRM
Competence/damage-inducible protein CinA {ECO:0000313|EMBL:CDF09264.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
competence/damage-inducible protein CinA
L3_083_000G1_scaffold_22_19
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


21273..22358
DNA (1086bp) protein (362aa)
Protein RecA n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N978_9FIRM
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Ca2+-transporting ATPase
L3_083_000G1_scaffold_22_20
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22351..23013
DNA (663bp) protein (221aa)
Regulatory protein RecX n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N9M2_9FIRM
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
regulatory protein
L3_083_000G1_scaffold_22_21
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23142..24695
DNA (1554bp) protein (518aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Ribonuclease Y n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NAY9_9FIRM
hypothetical protein
L3_083_000G1_scaffold_22_22
Eubacterium sp. CAG:252, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25132..26415
DNA (1284bp) protein (428aa)
Aspartate aminotransferase n=1 Tax=Eubacterium sp. CAG:252 RepID=R6KBE1_9FIRM
Aspartate aminotransferase {ECO:0000313|EMBL:CDB68419.1}; TaxID=1262887 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:252.;"
aspartate aminotransferase
L3_083_000G1_scaffold_22_23
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26483..27280
DNA (798bp) protein (266aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Pyrroline-5-carboxylate reductase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NB46_9FIRM
pyrroline-5-carboxylate reductase
L3_083_000G1_scaffold_22_24
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27299..27832
DNA (534bp) protein (178aa)
ADP-ribose pyrophosphatase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NB66_9FIRM
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:CDF09333.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
ADP-ribose pyrophosphatase
L3_083_000G1_scaffold_22_25
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27960..28532
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N7F2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF09334.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
hypothetical protein
L3_083_000G1_scaffold_22_26
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28503..29573)
DNA (1071bp) protein (357aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N9C7_9FIRM
phospho-2-dehydro-3-deoxyheptonate aldolase
L3_083_000G1_scaffold_22_27
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29744..31060
DNA (1317bp) protein (439aa)
Pyrimidine-nucleoside phosphorylase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N9T1_9FIRM
Pyrimidine-nucleoside phosphorylase {ECO:0000313|EMBL:CDF09336.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
pyrimidine-nucleoside phosphorylase
L3_083_000G1_scaffold_22_28
Eubacterium sp. CAG:248, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31150..31992
DNA (843bp) protein (281aa)
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; EC=5.3.1.17 {ECO:0000256|HAMAP-Rule:MF_00687};; 5-keto-4-deoxyuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; DKI isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; TaxID=1262885 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:248.;"
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase n=2 Tax=environmental samples RepID=R6JX40_9FIRM
5-keto-4-deoxyuronate isomerase
L3_083_000G1_scaffold_22_29
Eubacterium sp. CAG:248, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32215..33012
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NB71_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB65801.1}; TaxID=1262885 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:248.;"
gluconate 5-dehydrogenase
L3_083_000G1_scaffold_22_30
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33237..34283
DNA (1047bp) protein (349aa)
Sodium transport system ATP-binding protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N7F6_9FIRM
Sodium transport system ATP-binding protein {ECO:0000313|EMBL:CDF09339.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
sodium transport system ATP-binding protein
Displaying items 1-30 of 204 in total

View Taxonomy