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L3_083_000G1_scaffold_27

Search features with annotation key words

Displaying items 1-30 of 185 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_000G1_scaffold_27_1
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..945)
DNA (945bp) protein (315aa)
Uncharacterized protein n=2 Tax=Clostridium sp. 7_2_43FAA RepID=U6Q1S2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EJZ50492.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_083_000G1_scaffold_27_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1079..4018)
DNA (2940bp) protein (980aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6D6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96595.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
von willebrand factor, type A domain protein
L3_083_000G1_scaffold_27_3
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4035..4631)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1R5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96594.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
prepilin-type N-cleavage/methylation domain protein
L3_083_000G1_scaffold_27_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4645..6732)
DNA (2088bp) protein (696aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2B0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96593.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_083_000G1_scaffold_27_5
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6754..7674)
DNA (921bp) protein (307aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HC24_9CLOT
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:EEH96592.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_083_000G1_scaffold_27_6
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7683..8963)
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEI2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96591.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_083_000G1_scaffold_27_7
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8965..9513)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6D4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96590.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
fimbrial assembly family protein
L3_083_000G1_scaffold_27_8
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9526..10722)
DNA (1197bp) protein (399aa)
Type IV pilus assembly protein PilM n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1R4_9CLOT
Type IV pilus assembly protein PilM {ECO:0000313|EMBL:EEH96589.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
type IV pilus assembly protein PilM
L3_083_000G1_scaffold_27_9
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10998..11441)
DNA (444bp) protein (148aa)
Prepilin peptidase-dependent n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CFH1_9CLOT
Prepilin peptidase-dependent {ECO:0000313|EMBL:EOR28099.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
type IV pilin
L3_083_000G1_scaffold_27_10
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11661..12863)
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HC21_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96587.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
tapC; type IV pilus assembly protein TapC
L3_083_000G1_scaffold_27_11
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12880..14571)
DNA (1692bp) protein (564aa)
General secretory pathway protein E n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEH9_9CLOT
General secretory pathway protein E {ECO:0000313|EMBL:EEH96586.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
type IV pilus assembly protein TapB
L3_083_000G1_scaffold_27_12
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14709..15458)
DNA (750bp) protein (250aa)
hofD; type 4 prepilin-like protein (EC:3.4.23.43 2.1.1.-)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6D2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96585.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L3_083_000G1_scaffold_27_13
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15776..16180)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1R3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96584.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_083_000G1_scaffold_27_14
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16426..18051)
DNA (1626bp) protein (542aa)
Chaperonin n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2A5_9CLOT
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
groEL; chaperonin GroEL
L3_083_000G1_scaffold_27_15
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18066..18350)
DNA (285bp) protein (95aa)
Chaperonin n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HC18_9CLOT
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
groES; co-chaperonin GroES
L3_083_000G1_scaffold_27_16
unknown

Not on your lists

18432..18845
DNA (414bp) protein (138aa)

This feature has no annotations

L3_083_000G1_scaffold_27_17
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19144..20634)
DNA (1491bp) protein (497aa)
iron-dependent hydrogenase (EC:1.12.7.2)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6C9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96580.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L3_083_000G1_scaffold_27_18
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20781..22121)
DNA (1341bp) protein (447aa)
D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1R2_9CLOT
D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit {ECO:0000313|EMBL:EEH96579.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
D-tagatose-bisphosphate aldolase class II accessory protein AgaZ
L3_083_000G1_scaffold_27_19
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22272..23126)
DNA (855bp) protein (285aa)
Tagatose bisphosphate family class II aldolase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2A4_9CLOT
Tagatose bisphosphate family class II aldolase {ECO:0000313|EMBL:EEH96578.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
class II aldolase, tagatose bisphosphate family
L3_083_000G1_scaffold_27_20
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23339..24535)
DNA (1197bp) protein (399aa)
AgaS family putative sugar isomerase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HC14_9CLOT
AgaS family putative sugar isomerase {ECO:0000313|EMBL:EEH96577.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
putative phosphosugar isomerase
L3_083_000G1_scaffold_27_21
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24566..25297)
DNA (732bp) protein (244aa)
GntR family transcriptional regulator n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CGE1_9CLOT
GntR family transcriptional regulator {ECO:0000313|EMBL:EOR28110.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
bacterial regulatory s, gntR family protein
L3_083_000G1_scaffold_27_22
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25461..32309)
DNA (6849bp) protein (2283aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FBK2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDG02433.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
hypothetical protein
L3_083_000G1_scaffold_27_23
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32852..33373)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEH6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96576.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L3_083_000G1_scaffold_27_24
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33373..34512)
DNA (1140bp) protein (380aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
N-acetylglucosamine 6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6C7_9CLOT
L3_083_000G1_scaffold_27_25
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34713..35144
DNA (432bp) protein (144aa)
PTS system, mannose/fructose/sorbose family, IIA component n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1R1_9CLOT
PTS system, mannose/fructose/sorbose family, IIA component {ECO:0000313|EMBL:EEH96574.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
PTS system mannose-specific component IIAB-like protein
L3_083_000G1_scaffold_27_26
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35146..35424
DNA (279bp) protein (93aa)
Preprotein translocase, YajC subunit n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2A2_9CLOT
Preprotein translocase, YajC subunit {ECO:0000313|EMBL:EEH96573.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
preprotein translocase, YajC subunit
L3_083_000G1_scaffold_27_27
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35456..36625)
DNA (1170bp) protein (390aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2EL45_9FIRM
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ERI95417.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
AraC-type DNA-binding domain-containing proteins
L3_083_000G1_scaffold_27_28
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37000..37476
DNA (477bp) protein (159aa)
PTS system, mannose/fructose/sorbose family, IIB component (EC:2.7.1.69)
PTS system, mannose/fructose/sorbose family, IIB component n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2EQV3_9FIRM
PTS system, mannose/fructose/sorbose family, IIB component {ECO:0000313|EMBL:ERI95416.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
L3_083_000G1_scaffold_27_29
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37495..38307
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6C5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96570.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC
L3_083_000G1_scaffold_27_30
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38297..39142
DNA (846bp) protein (282aa)
PTS system, mannose/fructose/sorbose family, IID component n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1R0_9CLOT
PTS system, mannose/fructose/sorbose family, IID component {ECO:0000313|EMBL:EEH96569.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
PTS system IID component, Man family (TC 4.A.6)
Displaying items 1-30 of 185 in total

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