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L3_083_000G1_scaffold_41

Search features with annotation key words

Displaying items 1-30 of 197 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_000G1_scaffold_41_1
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..797)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Clostridium botulinum (strain H04402 065 / Type A5) RepID=E8ZV01_CLOB0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACA44847.1}; TaxID=498213 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Okra / Type B1).;"
L3_083_000G1_scaffold_41_2
unknown

Not on your lists

comp(764..934)
DNA (171bp) protein (57aa)

This feature has no annotations

L3_083_000G1_scaffold_41_3
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(922..1218)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Clostridium botulinum Af84 RepID=S8BLJ0_CLOBO
Nuclease {ECO:0000313|EMBL:KIN81221.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
hypothetical protein
L3_083_000G1_scaffold_41_4
unknown

Not on your lists

comp(1218..1316)
DNA (99bp) protein (33aa)

This feature has no annotations

L3_083_000G1_scaffold_41_5
Lachnospiraceae bacterium TWA4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1318..1812)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0DAK9_9CLOT
TWA4_scaffold00001, whole genome shotgun sequence {ECO:0000313|EMBL:KIR03439.1}; TaxID=1392836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium TWA4.;"
hypothetical protein
L3_083_000G1_scaffold_41_6
unknown

Not on your lists

comp(1826..2152)
DNA (327bp) protein (109aa)

This feature has no annotations

L3_083_000G1_scaffold_41_7
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2189..3454)
DNA (1266bp) protein (422aa)
Phage helicase n=2 Tax=Clostridium botulinum RepID=B1IGQ4_CLOBK
Helicase SNF2 {ECO:0000313|EMBL:KIN81222.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
phage helicase
L3_083_000G1_scaffold_41_8
unknown

Not on your lists

comp(3442..3594)
DNA (153bp) protein (51aa)

This feature has no annotations

L3_083_000G1_scaffold_41_9
unknown

Not on your lists

comp(3572..3967)
DNA (396bp) protein (132aa)

This feature has no annotations

L3_083_000G1_scaffold_41_10
unknown

Not on your lists

comp(3921..4097)
DNA (177bp) protein (59aa)

This feature has no annotations

L3_083_000G1_scaffold_41_11
unknown

Not on your lists

comp(4073..4291)
DNA (219bp) protein (73aa)

This feature has no annotations

L3_083_000G1_scaffold_41_12
unknown

Not on your lists

comp(4264..4500)
DNA (237bp) protein (79aa)

This feature has no annotations

L3_083_000G1_scaffold_41_13
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4500..4775)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MX29_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX43992.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_083_000G1_scaffold_41_14
unknown

Not on your lists

comp(4830..4979)
DNA (150bp) protein (50aa)

This feature has no annotations

L3_083_000G1_scaffold_41_15
Lactobacillus crispatus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5040..5846)
DNA (807bp) protein (269aa)
Uncharacterized protein n=13 Tax=Clostridium difficile RepID=T2ZWK3_CLODI
Putative toxin-antitoxin system, toxin component, Bro family {ECO:0000313|EMBL:EFQ43465.1}; TaxID=440496 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus CTV-05.;"
Tec protein
L3_083_000G1_scaffold_41_16
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6058..6288)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Clostridium botulinum Af84 RepID=S8BKU8_CLOBO
hypothetical protein
HTH-type transcriptional regulator SinR {ECO:0000313|EMBL:EDS78091.1}; TaxID=445337 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum C str. Eklund.;"
L3_083_000G1_scaffold_41_17
Clostridium tetani, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6470..6916
DNA (447bp) protein (149aa)
Transcriptional regulator, MerR family n=1 Tax=Clostridium botulinum (strain H04402 065 / Type A5) RepID=E8ZV10_CLOB0
MerR family transcriptional regulator
Transcriptional regulator sinR {ECO:0000313|EMBL:CDI49996.1}; TaxID=1231072 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetani 12124569.;"
L3_083_000G1_scaffold_41_18
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6935..7348
DNA (414bp) protein (138aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum RepID=B1IGR2_CLOBK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACA43659.1}; TaxID=498213 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Okra / Type B1).;"
L3_083_000G1_scaffold_41_19
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7361..9031
DNA (1671bp) protein (557aa)
resolvase n=1 Tax=Clostridium botulinum RepID=UPI0002EA8684
Resolvase {ECO:0000313|EMBL:KJU72492.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
resolvase
L3_083_000G1_scaffold_41_20
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9325..9990)
DNA (666bp) protein (222aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00114}; TaxID=1262755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:237.;"
deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase n=1 Tax=Blautia sp. CAG:237 RepID=R6KY04_9FIRM
L3_083_000G1_scaffold_41_21
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10063..10923)
DNA (861bp) protein (287aa)
dacB; D-alanyl-D-alanine carboxypeptidase DacB (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase DacB {ECO:0000313|EMBL:AGX43602.1}; EC=3.4.16.4 {ECO:0000313|EMBL:AGX43602.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
D-alanyl-D-alanine carboxypeptidase DacB n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MVX9_CLOSA
L3_083_000G1_scaffold_41_22
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11064..11627
DNA (564bp) protein (188aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum B RepID=B2TQW3_CLOBB
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CDH91268.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L3_083_000G1_scaffold_41_23
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11620..12105
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BTS3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR20397.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
ytfJ; sporulation protein YtfJ
L3_083_000G1_scaffold_41_24
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12169..12798)
DNA (630bp) protein (210aa)
Segregation and condensation protein B n=1 Tax=Clostridium colicanis 209318 RepID=N9XQN0_9CLOT
Segregation and condensation protein B {ECO:0000256|HAMAP-Rule:MF_01804, ECO:0000256|SAAS:SAAS00086417}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
scpB; segregation and condensation protein B
L3_083_000G1_scaffold_41_25
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12770..13519)
DNA (750bp) protein (250aa)
Segregation and condensation protein A n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LUL6_CLOB8
scpA/B family protein
Segregation and condensation protein A {ECO:0000256|HAMAP-Rule:MF_01805, ECO:0000256|SAAS:SAAS00093938}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_083_000G1_scaffold_41_26
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13638..14819)
DNA (1182bp) protein (394aa)
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:EHJ00081.1}; EC=3.4.16.4 {ECO:0000313|EMBL:EHJ00081.1};; Flags: Precursor;; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
penicillin-binding protein DacF (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Clostridium sp. DL-VIII RepID=G7M3C0_9CLOT
L3_083_000G1_scaffold_41_27
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14990..16294)
DNA (1305bp) protein (435aa)
Thymidine phosphorylase {ECO:0000313|EMBL:KJU70491.1}; EC=2.4.2.4 {ECO:0000313|EMBL:KJU70491.1};; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
pdp; pyrimidine-nucleoside phosphorylase (EC:2.4.2.2)
Pyrimidine-nucleoside phosphorylase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HFX2_9CLOT
L3_083_000G1_scaffold_41_28
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16315..17484)
DNA (1170bp) protein (390aa)
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|HAMAP-Rule:MF_00740}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
Phosphopentomutase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QGG0_9CLOT
deoB; phosphopentomutase
L3_083_000G1_scaffold_41_29
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17538..18416)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WGK7_9CLOT
phage integrase family protein
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L3_083_000G1_scaffold_41_30
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18502..19134)
DNA (633bp) protein (211aa)
Stage II sporulation protein M n=2 Tax=Clostridium botulinum B RepID=B2TQW9_CLOBB
spoIIM; stage II sporulation protein M
Sporulation protein {ECO:0000313|EMBL:KJU70493.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
Displaying items 1-30 of 197 in total

View Taxonomy