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L3_083_000G1_scaffold_61

Search features with annotation key words

Displaying items 1-30 of 142 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_000G1_scaffold_61_1
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..307
DNA (306bp) protein (102aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WT49_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX72738.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_083_000G1_scaffold_61_2
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(256..762)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V2F2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77556.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_083_000G1_scaffold_61_3
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

841..1233
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VA57_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77557.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L3_083_000G1_scaffold_61_4
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1280..1927)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UH40_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77558.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
channel protein, hemolysin III family
L3_083_000G1_scaffold_61_5
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2160..3401
DNA (1242bp) protein (414aa)
Metal ion transporter metal ion (Mn2+/Fe2+) transporter (Nramp) family n=1 Tax=Roseburia sp. CAG:18 RepID=R5UP82_9FIRM
Metal ion transporter metal ion (Mn2+/Fe2+) transporter (Nramp) family {ECO:0000313|EMBL:CCZ77559.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Mn2+ and Fe2+ transporters of the NRAMP family
L3_083_000G1_scaffold_61_6
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3398..4291)
DNA (894bp) protein (298aa)
AraC-type DNA-binding domain-containing proteins n=1 Tax=Roseburia sp. CAG:18 RepID=R5UHT5_9FIRM
AraC-type DNA-binding domain-containing proteins {ECO:0000313|EMBL:CCZ77560.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
AraC-type DNA-binding domain-containing proteins
L3_083_000G1_scaffold_61_7
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4447..6114
DNA (1668bp) protein (556aa)
Alpha amylase catalytic domain protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V2F6_9FIRM
Alpha amylase catalytic domain protein {ECO:0000313|EMBL:CCZ77561.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Glycosidases
L3_083_000G1_scaffold_61_8
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6184..7638
DNA (1455bp) protein (485aa)
ImpB/MucB/SamB family protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VA60_9FIRM
ImpB/MucB/SamB family protein {ECO:0000313|EMBL:CCZ77562.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Nucleotidyltransferase/DNA polymerase involved in DNA repair
L3_083_000G1_scaffold_61_9
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7635..7859
DNA (225bp) protein (75aa)
YolD-like protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UH45_9FIRM
YolD-like protein {ECO:0000313|EMBL:CCZ77563.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
YolD-like protein.
L3_083_000G1_scaffold_61_10
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7913..8608
DNA (696bp) protein (232aa)
Polysaccharide deacetylase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UP87_9FIRM
Polysaccharide deacetylase {ECO:0000313|EMBL:CCZ77564.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Predicted xylanase/chitin deacetylase
L3_083_000G1_scaffold_61_11
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8690..9580
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UHT9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77565.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Protein of unknown function (DUF3737).
L3_083_000G1_scaffold_61_12
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9577..10011
DNA (435bp) protein (145aa)
Bacterial SH3 domain n=1 Tax=Roseburia sp. CAG:18 RepID=R5V2G0_9FIRM
Bacterial SH3 domain {ECO:0000313|EMBL:CCZ77566.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Bacterial SH3 domain.
L3_083_000G1_scaffold_61_13
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10048..12285
DNA (2238bp) protein (746aa)
Alpha-glucosidases, family 31 of glycosyl hydrolases (EC:3.2.1.20)
Alpha-glucosidases family 31 of glycosyl hydrolases n=1 Tax=Roseburia sp. CAG:18 RepID=R5VA63_9FIRM
Alpha-glucosidases family 31 of glycosyl hydrolases {ECO:0000313|EMBL:CCZ77567.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L3_083_000G1_scaffold_61_14
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12336..12815
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UH47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77568.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_083_000G1_scaffold_61_15
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12854..15385
DNA (2532bp) protein (844aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UP91_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77569.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_083_000G1_scaffold_61_16
unknown

Not on your lists

15428..15535
DNA (108bp) protein (36aa)

This feature has no annotations

L3_083_000G1_scaffold_61_17
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15532..15786
DNA (255bp) protein (85aa)
Phosphotransferase System HPr (HPr) Family n=1 Tax=Roseburia sp. CAG:18 RepID=R5UHU4_9FIRM
Phosphotransferase System HPr (HPr) Family {ECO:0000313|EMBL:CCZ77570.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
phosphotransferase system, HPr-related protein
L3_083_000G1_scaffold_61_18
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15808..16296
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V2G4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77571.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_083_000G1_scaffold_61_19
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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16343..16570
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B5V6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN76692.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L3_083_000G1_scaffold_61_20
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16668..18701)
DNA (2034bp) protein (678aa)
Glycogen debranching enzyme archaeal type putative n=1 Tax=Roseburia sp. CAG:18 RepID=R5VA67_9FIRM
Glycogen debranching enzyme archaeal type putative {ECO:0000313|EMBL:CCZ77572.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
glycogen debranching enzyme, archaeal type, putative
L3_083_000G1_scaffold_61_21
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18858..19358
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UH52_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77573.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_083_000G1_scaffold_61_22
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19409..19831)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UP94_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77574.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_083_000G1_scaffold_61_23
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19916..20698
DNA (783bp) protein (261aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Glutamate racemase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UHU7_9FIRM
glutamate racemase
L3_083_000G1_scaffold_61_24
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21084..22433
DNA (1350bp) protein (450aa)
Transporter UIT6 family (TC 9.B.53) n=1 Tax=Roseburia sp. CAG:18 RepID=R5V2G9_9FIRM
Transporter UIT6 family (TC 9.B.53) {ECO:0000313|EMBL:CCZ77576.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
transporter, UIT6 family (TC 9.B.53)
L3_083_000G1_scaffold_61_25
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22447..23409
DNA (963bp) protein (321aa)
Putative cytidylate kinase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YDX9_9FIRM
Putative cytidylate kinase {ECO:0000313|EMBL:CDA25728.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L3_083_000G1_scaffold_61_26
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23541..24452
DNA (912bp) protein (304aa)
CAAX protease self-immunity n=1 Tax=Roseburia sp. CAG:197 RepID=R5YRP8_9FIRM
CAAX protease self-immunity {ECO:0000313|EMBL:CDA24126.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
CAAX amino terminal protease family protein
L3_083_000G1_scaffold_61_27
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24485..24658)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VF32_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79347.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_083_000G1_scaffold_61_28
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24704..24880)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UM25_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79348.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_083_000G1_scaffold_61_29
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24905..25900)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UUG2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79349.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_083_000G1_scaffold_61_30
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25960..27564)
DNA (1605bp) protein (535aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
CTP synthase (EC:6.3.4.2)
CTP synthase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMM5_9FIRM
Displaying items 1-30 of 142 in total

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