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L3_083_000G1_scaffold_100

Search features with annotation key words

Displaying items 1-30 of 104 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_000G1_scaffold_100_1
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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107..1462
DNA (1356bp) protein (452aa)
Receptor family ligand-binding protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVX8_9CLOT
Receptor family ligand-binding protein {ECO:0000313|EMBL:EEG56757.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
livK; branched-chain amino acid ABC transporter substrate-binding protein
L3_083_000G1_scaffold_100_2
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2517..3116
DNA (600bp) protein (200aa)
RelA/SpoT domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EKW6_9FIRM
RelA/SpoT domain protein {ECO:0000313|EMBL:EEQ58305.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L3_083_000G1_scaffold_100_3
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3400..4746
DNA (1347bp) protein (449aa)
Branched-chain amino acid transport system II carrier protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EEP5_9FIRM
Branched-chain amino acid transport system II carrier protein {ECO:0000313|EMBL:EEQ58291.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
branched-chain amino acid transport system II carrier protein
L3_083_000G1_scaffold_100_4
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4754..6484
DNA (1731bp) protein (577aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IR51_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44688.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
single-stranded-DNA-specific exonuclease RecJ
L3_083_000G1_scaffold_100_5
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6548..8104)
DNA (1557bp) protein (519aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ESG2_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEQ60956.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
ABC transporter
L3_083_000G1_scaffold_100_6
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8595..11237
DNA (2643bp) protein (881aa)
ATPase, P-type (transporting), HAD superfamily, subfamily IC (EC:3.6.3.8)
Putative potassium/sodium efflux P-type ATPase, fungal-type n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CUH8_9CLOT
Putative potassium/sodium efflux P-type ATPase, fungal-type {ECO:0000313|EMBL:EEG57178.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
L3_083_000G1_scaffold_100_7
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11352..11954
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9ZA01_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX97352.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
hypothetical protein
L3_083_000G1_scaffold_100_8
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12313..13617
DNA (1305bp) protein (435aa)
GMP synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00008728}; EC=6.3.5.2 {ECO:0000256|SAAS:SAAS00008728};; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
GMP synthase (Glutamine-hydrolyzing) domain-containing protein n=2 Tax=Clostridium bolteae RepID=R0A5K3_9CLOT
GMP synthase
L3_083_000G1_scaffold_100_9
unknown

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14190..14378
DNA (189bp) protein (63aa)

This feature has no annotations

L3_083_000G1_scaffold_100_10
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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14350..14535
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X7R0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY91716.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
putative dGTPase
L3_083_000G1_scaffold_100_11
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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14726..16507
DNA (1782bp) protein (594aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RX48_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC74264.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
peptidase S41
L3_083_000G1_scaffold_100_12
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16636..17235
DNA (600bp) protein (200aa)
Uncharacterized protein n=12 Tax=Clostridium RepID=A8RPV5_9CLOT
Sporulation protein YyaC {ECO:0000313|EMBL:ENZ10013.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
sporulation protein YyaC
L3_083_000G1_scaffold_100_13
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17297..18550
DNA (1254bp) protein (418aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HMP2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE97318.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
peptidoglycan-binding lysin domain-containing protein
L3_083_000G1_scaffold_100_14
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18839..20128
DNA (1290bp) protein (430aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=N9X3V7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ10011.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
hypothetical protein
L3_083_000G1_scaffold_100_15
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20168..21112
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J608_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44357.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
ROK family glucokinase
L3_083_000G1_scaffold_100_16
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21176..22237)
DNA (1062bp) protein (354aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HMQ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE97332.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
Putative cell wall binding repeat.
L3_083_000G1_scaffold_100_17
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22308..23714)
DNA (1407bp) protein (469aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
Uncharacterized protein n=5 Tax=Clostridium RepID=A8RPU8_9CLOT
Signal transduction histidine kinase
L3_083_000G1_scaffold_100_18
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23711..24421)
DNA (711bp) protein (237aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HMQ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE97334.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
winged helix family two component transcriptional regulator
L3_083_000G1_scaffold_100_19
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24475..26931)
DNA (2457bp) protein (819aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
Endonuclease MutS2 n=8 Tax=Clostridium clostridioforme RepID=G5I1W0_9CLOT
MutS2 family protein
L3_083_000G1_scaffold_100_20
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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27106..28419
DNA (1314bp) protein (438aa)
PDZ/DHR/GLGF protein n=9 Tax=Clostridium RepID=N9WQF8_9CLOT
PDZ/DHR/GLGF protein {ECO:0000313|EMBL:ENZ05135.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
PDZ/DHR/GLGF domain-containing protein
L3_083_000G1_scaffold_100_21
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28482..29426
DNA (945bp) protein (315aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=A8RPU1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP17068.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
metal dependent phosphohydrolase
L3_083_000G1_scaffold_100_22
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29467..31140
DNA (1674bp) protein (558aa)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Clostridium bolteae 90B8 RepID=N9ZBD2_9CLOT
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:ENZ37120.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
TrmA family RNA methyltransferase
L3_083_000G1_scaffold_100_23
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31437..31643
DNA (207bp) protein (69aa)
transcriptional regulator n=1 Tax=Allofustis seminis RepID=UPI000369D27D
Uncharacterized protein {ECO:0000313|EMBL:EOS23482.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
XRE family transcriptional regulator
L3_083_000G1_scaffold_100_24
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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31676..34012
DNA (2337bp) protein (779aa)
Type I site-specific restriction-modification system, R (restriction) subunit and related helicases (EC:3.1.21.3)
Type III restriction enzyme res subunit n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HQG9_9FIRM
Type III restriction enzyme res subunit {ECO:0000313|EMBL:CCY27047.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L3_083_000G1_scaffold_100_25
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

34014..35534
DNA (1521bp) protein (507aa)
N-6 DNA Methylase n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HC21_9FIRM
N-6 DNA Methylase {ECO:0000313|EMBL:CCY27048.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
N-6 DNA methylase
L3_083_000G1_scaffold_100_26
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

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35531..37012
DNA (1482bp) protein (494aa)
Type I restriction modification DNA specificity domain protein n=1 Tax=Finegoldia magna ATCC 53516 RepID=D6S6K0_FINMA
Type I restriction modification DNA specificity domain protein {ECO:0000313|EMBL:EFH93704.1}; TaxID=525282 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ATCC 53516.;"
hsdS; type I restriction-modification system specificity subunit HsdS
L3_083_000G1_scaffold_100_27
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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37023..37634
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0GAH9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR45511.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
L3_083_000G1_scaffold_100_28
Flavobacteria bacterium BBFL7, Flavobacteriia, Bacteroidetes, Bacteria

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37725..38399
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Flavobacteria bacterium (strain BBFL7) RepID=Q26CI6_FLABB
Uncharacterized protein {ECO:0000313|EMBL:EAS19034.1}; TaxID=156586 species="Bacteria; Bacteroidetes; Flavobacteriia.;" source="Flavobacteria bacterium (strain BBFL7).;"
Domain of unknown function (DUF1883)./TIR domain.
L3_083_000G1_scaffold_100_29
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38993..39349)
DNA (357bp) protein (119aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8S510_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP12710.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L3_083_000G1_scaffold_100_30
unknown

Not on your lists

39531..39677
DNA (147bp) protein (49aa)

This feature has no annotations

Displaying items 1-30 of 104 in total

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