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L3_083_000G1_scaffold_103

Search features with annotation key words

Displaying items 1-30 of 118 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_000G1_scaffold_103_1
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..250)
DNA (249bp) protein (83aa)
50S ribosomal protein L13 n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N9T6_9FIRM
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
rplM; 50S ribosomal protein L13
L3_083_000G1_scaffold_103_2
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(566..1303)
DNA (738bp) protein (246aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
tRNA pseudouridine synthase A n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N5X9_9FIRM
tRNA-pseudouridine synthase I
L3_083_000G1_scaffold_103_3
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1587..2390)
DNA (804bp) protein (268aa)
Cobalt/nickel transport system permease protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N7W8_9FIRM
Cobalt/nickel transport system permease protein {ECO:0000313|EMBL:CDF08840.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
cobalt/nickel transport system permease
L3_083_000G1_scaffold_103_4
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2423..3331)
DNA (909bp) protein (303aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Cobalt/nickel transport system ATP-binding protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N867_9FIRM
cobalt/nickel transport system ATP-binding protein
L3_083_000G1_scaffold_103_5
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3334..4218)
DNA (885bp) protein (295aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Cobalt/nickel transport system ATP-binding protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N9N8_9FIRM
cobalt/nickel transport system ATP-binding protein
L3_083_000G1_scaffold_103_6
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(4453..4989)
DNA (537bp) protein (179aa)
50S ribosomal protein L17 n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N9T9_9FIRM
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
rplQ; 50S ribosomal protein L17
L3_083_000G1_scaffold_103_7
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5083..6051)
DNA (969bp) protein (323aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
DNA-directed RNA polymerase subunit alpha n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N5Y4_9FIRM
DNA-directed RNA polymerase subunit alpha
L3_083_000G1_scaffold_103_8
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(6202..6795)
DNA (594bp) protein (198aa)
30S ribosomal protein S4 n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N7X1_9FIRM
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
30S ribosomal protein S4
L3_083_000G1_scaffold_103_9
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(6816..7211)
DNA (396bp) protein (132aa)
30S ribosomal protein S11 n=2 Tax=environmental samples RepID=R7HDY1_9FIRM
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
30S ribosomal protein S11
L3_083_000G1_scaffold_103_10
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(7251..7625)
DNA (375bp) protein (125aa)
30S ribosomal protein S13 n=2 Tax=environmental samples RepID=R6K7J8_9FIRM
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
rpsM; 30S ribosomal protein S13
L3_083_000G1_scaffold_103_11
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8182..8400)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=4 Tax=Eubacterium RepID=C4Z2V3_EUBE2
translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
L3_083_000G1_scaffold_103_12
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8434..8697)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N5Y9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF08849.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
hypothetical protein
L3_083_000G1_scaffold_103_13
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8718..9473)
DNA (756bp) protein (252aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Methionine aminopeptidase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N7X5_9FIRM
methionine aminopeptidase
L3_083_000G1_scaffold_103_14
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9481..10125)
DNA (645bp) protein (215aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Adenylate kinase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N877_9FIRM
adk; adenylate kinase
L3_083_000G1_scaffold_103_15
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(10204..11523)
DNA (1320bp) protein (440aa)
Protein translocase subunit SecY n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N9P8_9FIRM
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
preprotein translocase subunit SecY
L3_083_000G1_scaffold_103_16
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(11525..11965)
DNA (441bp) protein (147aa)
50S ribosomal protein L15 n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N9U7_9FIRM
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
rplO; 50S ribosomal protein L15
L3_083_000G1_scaffold_103_17
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(11994..12179)
DNA (186bp) protein (62aa)
50S ribosomal protein L30 n=2 Tax=environmental samples RepID=R6KAK9_9FIRM
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
rpmD; 50S ribosomal protein L30
L3_083_000G1_scaffold_103_18
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(12228..12737)
DNA (510bp) protein (170aa)
30S ribosomal protein S5 n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N7Y0_9FIRM
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
30S ribosomal protein S5
L3_083_000G1_scaffold_103_19
Eubacterium sp. CAG:248, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(12760..13128)
DNA (369bp) protein (123aa)
50S ribosomal protein L18 n=2 Tax=environmental samples RepID=R6JW94_9FIRM
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1262885 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:248.;"
rplR; 50S ribosomal protein L18
L3_083_000G1_scaffold_103_20
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(13148..13690)
DNA (543bp) protein (181aa)
50S ribosomal protein L6 n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N9Q5_9FIRM
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
rplF; 50S ribosomal protein L6
L3_083_000G1_scaffold_103_21
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(13773..14168)
DNA (396bp) protein (132aa)
30S ribosomal protein S8 n=2 Tax=environmental samples RepID=R6K0X9_9FIRM
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
rpsH; 30S ribosomal protein S8
L3_083_000G1_scaffold_103_22
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(14342..14527)
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=4 Tax=Eubacterium RepID=RS14Z_EUBE2
small subunit ribosomal protein S14
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
L3_083_000G1_scaffold_103_23
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(14547..15086)
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=2 Tax=environmental samples RepID=R6KYD2_9FIRM
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
50S ribosomal protein L5
L3_083_000G1_scaffold_103_24
Eubacterium sp. CAG:248, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(15108..15422)
DNA (315bp) protein (105aa)
50S ribosomal protein L24 n=2 Tax=environmental samples RepID=R6JW97_9FIRM
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1262885 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:248.;"
rplX; 50S ribosomal protein L24
L3_083_000G1_scaffold_103_25
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(15434..15802)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N9Q9_9FIRM
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
rplN; 50S ribosomal protein L14
L3_083_000G1_scaffold_103_26
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(15851..16108)
DNA (258bp) protein (86aa)
30S ribosomal protein S17 n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N9V5_9FIRM
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
30S ribosomal protein S17
L3_083_000G1_scaffold_103_27
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(16156..16356)
DNA (201bp) protein (67aa)
50S ribosomal protein L29 n=2 Tax=Eubacterium RepID=RL29_EUBE2
50S ribosomal protein L29
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
L3_083_000G1_scaffold_103_28
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(16346..16783)
DNA (438bp) protein (146aa)
50S ribosomal protein L16 n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HBX3_9FIRM
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
rplP; 50S ribosomal protein L16
L3_083_000G1_scaffold_103_29
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(16783..17442)
DNA (660bp) protein (220aa)
30S ribosomal protein S3 n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HDV5_9FIRM
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
30S ribosomal protein S3
L3_083_000G1_scaffold_103_30
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(17475..17861)
DNA (387bp) protein (129aa)
50S ribosomal protein L22 n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HG04_9FIRM
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
rplV; 50S ribosomal protein L22
Displaying items 1-30 of 118 in total

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