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L3_083_000G1_scaffold_110

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Displaying items 1-30 of 109 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_000G1_scaffold_110_1
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..951
DNA (951bp) protein (317aa)
Hydrogenase-4 component B / Formate hydrogenlyase subunit 3 n=1 Tax=Clostridium sp. CAG:265 RepID=R6LJ86_9CLOT
Monovalent cation/H+ antiporter subunit D {ECO:0000313|EMBL:KAJ53370.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit
L3_083_000G1_scaffold_110_2
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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965..1969
DNA (1005bp) protein (335aa)
NADH dehydrogenase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QN52_9CLOT
Respiratory-chain NADH dehydrogenase subunit 1 {ECO:0000313|EMBL:KAJ53371.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
cooK; carbon monoxide-induced hydrogenase subunit CooK
L3_083_000G1_scaffold_110_3
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1960..2397
DNA (438bp) protein (146aa)
ech2C; Ech-type complex subunit Ech2C (EC:1.12.7.2)
NADH ubiquinone oxidoreductase, subunit n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QN29_9CLOT
Hydrogenase-4 subunit I {ECO:0000313|EMBL:KAJ53372.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
L3_083_000G1_scaffold_110_4
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2397..2855
DNA (459bp) protein (153aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6FU36_9CLOT
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:CDB15575.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
NADH-plastoquinone oxidoreductase subunit
L3_083_000G1_scaffold_110_5
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3202..3723
DNA (522bp) protein (174aa)
GnaT-family acetyltransferase n=2 Tax=Clostridium botulinum B RepID=B2TKR8_CLOBB
GnaT-family acetyltransferase
GnaT-family acetyltransferase {ECO:0000313|EMBL:ACD22038.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L3_083_000G1_scaffold_110_6
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3720..3875)
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MSC3_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX42546.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_083_000G1_scaffold_110_7
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4081..5031
DNA (951bp) protein (317aa)
Putative uncharacterized protein n=2 Tax=Clostridium botulinum E RepID=B2V260_CLOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIL09075.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L3_083_000G1_scaffold_110_8
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5041..6087
DNA (1047bp) protein (349aa)
dinB; DNA polymerase IV (EC:2.7.7.7)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
DNA polymerase IV n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MWG0_CLOSA
L3_083_000G1_scaffold_110_9
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

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6444..7628
DNA (1185bp) protein (395aa)
tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
Tryptophan synthase beta chain n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JJJ0_CELLD
L3_083_000G1_scaffold_110_10
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7743..10043
DNA (2301bp) protein (767aa)
Putative ATP-dependent protease n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q445_9CLOT
Putative ATP-dependent protease {ECO:0000313|EMBL:EKY22774.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
ATP-dependent protease
L3_083_000G1_scaffold_110_11
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10369..10728
DNA (360bp) protein (120aa)
Anti-sigma F factor antagonist n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EYD3_9CLOT
Anti-sigma F factor antagonist {ECO:0000256|RuleBase:RU003749}; Stage II sporulation protein {ECO:0000256|RuleBase:RU003749}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
spoIIAA; anti-sigma F factor antagonist
L3_083_000G1_scaffold_110_12
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10718..11149
DNA (432bp) protein (144aa)
Anti-sigma F factor {ECO:0000256|HAMAP-Rule:MF_00637}; EC=2.7.11.1 {ECO:0000256|HAMAP-Rule:MF_00637};; Stage II sporulation protein AB {ECO:0000256|HAMAP-Rule:MF_00637}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
spoIIAB; anti-sigma F factor (EC:2.7.11.1)
Anti-sigma F factor n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C6B0_9CLOT
L3_083_000G1_scaffold_110_13
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11161..11916
DNA (756bp) protein (252aa)
RNA polymerase sigma factor n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F8E7_9CLOT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
sigF; sporulation sigma factor SigF
L3_083_000G1_scaffold_110_14
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12044..13198)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CF21_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR27853.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
3D domain protein
L3_083_000G1_scaffold_110_15
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13390..13842
DNA (453bp) protein (151aa)
Putative Stage V sporulation protein AC n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FKY8_9CLOT
spoVAC; stage V sporulation protein AC
Stage V sporulation protein AC {ECO:0000313|EMBL:AIY82971.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_083_000G1_scaffold_110_16
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13858..14883
DNA (1026bp) protein (342aa)
Stage V sporulation protein AD n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MRM2_CLOSA
spoVAD1; stage V sporulation protein AD
Stage V sporulation protein AD {ECO:0000313|EMBL:AGX42077.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_083_000G1_scaffold_110_17
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14898..15254
DNA (357bp) protein (119aa)
Stage V sporulation protein AE n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8B7_9CLOT
Stage V sporulation protein AE {ECO:0000313|EMBL:EEH98843.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
spoVAE; stage V sporulation protein AE
L3_083_000G1_scaffold_110_18
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15363..17852
DNA (2490bp) protein (830aa)
ATPase family protein n=2 Tax=Clostridium botulinum B RepID=B2TLY6_CLOBB
HAD ATPase, P-type, IC family protein {ECO:0000313|EMBL:AIY80911.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
calcium-transporting ATPase
L3_083_000G1_scaffold_110_19
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17868..19568
DNA (1701bp) protein (567aa)
Putative competence protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F8F1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJU70778.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
hypothetical protein
L3_083_000G1_scaffold_110_20
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19595..20629
DNA (1035bp) protein (345aa)
holA; DNA polymerase III, subunit delta (EC:2.7.7.7)
DNA polymerase III, delta subunit n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HG18_9CLOT
DNA polymerase III, delta subunit {ECO:0000313|EMBL:EEH98840.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L3_083_000G1_scaffold_110_21
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20708..20971)
DNA (264bp) protein (88aa)
30S ribosomal protein S20 n=2 Tax=environmental samples RepID=R6FR12_9CLOT
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
rpsT; 30S ribosomal protein S20
L3_083_000G1_scaffold_110_22
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21145..22119
DNA (975bp) protein (325aa)
Germination protease {ECO:0000256|HAMAP-Rule:MF_00626}; EC=3.4.24.78 {ECO:0000256|HAMAP-Rule:MF_00626};; GPR endopeptidase {ECO:0000256|HAMAP-Rule:MF_00626}; Germination proteinase {ECO:0000256|HAMAP-Rule:MF_00626}; Spore protease {ECO:0000256|HAMAP-Rule:MF_00626}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
gpr; GPR endopeptidase (EC:3.4.24.78)
GPR endopeptidase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8B5_9CLOT
L3_083_000G1_scaffold_110_23
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22199..23248
DNA (1050bp) protein (350aa)
Stage II sporulation protein P n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3V6_9CLOT
Stage II sporulation protein P {ECO:0000313|EMBL:EEH98837.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
stage II sporulation P family protein
L3_083_000G1_scaffold_110_24
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23313..23639
DNA (327bp) protein (109aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum B RepID=B2TLZ2_CLOBB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY81755.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
L3_083_000G1_scaffold_110_25
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23767..25572
DNA (1806bp) protein (602aa)
lepA; elongation factor 4 (EC:3.6.5.n1)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Elongation factor 4 n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MRN3_CLOSA
L3_083_000G1_scaffold_110_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25794..26063
DNA (270bp) protein (90aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q0SRD9_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG87598.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_083_000G1_scaffold_110_27
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26148..26585
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H586_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99578.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_083_000G1_scaffold_110_28
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26641..27765
DNA (1125bp) protein (375aa)
hemN; oxygen-independent coproporphyrinogen-III oxidase 1 (EC:1.3.99.22)
Putative oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3V4_9CLOT
Putative oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:EEH98832.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L3_083_000G1_scaffold_110_29
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27939..28970
DNA (1032bp) protein (344aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q561_9CLOT
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hrcA; heat-inducible transcription repressor HrcA
L3_083_000G1_scaffold_110_30
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29000..29614
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HG08_9CLOT
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
grpE; heat shock protein GrpE
Displaying items 1-30 of 109 in total

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