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L3_083_000G1_scaffold_111

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Displaying items 1-30 of 96 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_000G1_scaffold_111_1
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..3880
DNA (3879bp) protein (1293aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
DNA-directed RNA polymerase subunit beta n=4 Tax=Clostridium bolteae RepID=N9ZZN8_9CLOT
DNA-directed RNA polymerase subunit beta
L3_083_000G1_scaffold_111_2
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3894..7604
DNA (3711bp) protein (1237aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
DNA-directed RNA polymerase subunit beta' n=3 Tax=Clostridium bolteae RepID=A8RPH5_9CLOT
DNA-directed RNA polymerase subunit beta'
L3_083_000G1_scaffold_111_3
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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7764..8441
DNA (678bp) protein (226aa)
Transcriptional regulators n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GQI4_9FIRM
Transcriptional regulators
Transcriptional regulators {ECO:0000313|EMBL:CBL40059.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_083_000G1_scaffold_111_4
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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8566..9813
DNA (1248bp) protein (416aa)
2-dehydro-3-deoxy-6-phosphogalactonate aldolase n=1 Tax=Blautia producta RepID=UPI000376B12B
Uncharacterized protein {ECO:0000313|EMBL:EGG82887.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily
L3_083_000G1_scaffold_111_5
Megamonas hypermegale, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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9844..10863
DNA (1020bp) protein (340aa)
Tripartite ATP-independent periplasmic transporter solute receptor, DctP family n=1 Tax=Megamonas hypermegale ART12/1 RepID=D4KEH2_9FIRM
tripartite ATP-independent periplasmic transporter solute receptor, DctP family
Tripartite ATP-independent periplasmic transporter solute receptor, DctP family {ECO:0000313|EMBL:CBL06769.1}; TaxID=657316 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas hypermegale ART12/1.;"
L3_083_000G1_scaffold_111_6
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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10875..11372
DNA (498bp) protein (166aa)
Tripartite ATP-independent periplasmic transporter n=2 Tax=Anaerostipes RepID=E5VVD8_9FIRM
Tripartite ATP-independent periplasmic transporter {ECO:0000313|EMBL:CDC38033.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
hypothetical protein
L3_083_000G1_scaffold_111_7
Anaerostipes sp. 3_2_56FAA, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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11369..12643
DNA (1275bp) protein (425aa)
DctM transporter n=2 Tax=Anaerostipes RepID=E5VVD7_9FIRM
DctM transporter {ECO:0000313|EMBL:EFV22227.1}; TaxID=665937 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes sp. 3_2_56FAA.;"
TRAP transporter, DctM subunit
L3_083_000G1_scaffold_111_8
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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12706..13479
DNA (774bp) protein (258aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WQ17_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX75934.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
L3_083_000G1_scaffold_111_9
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13701..14120
DNA (420bp) protein (140aa)
30S ribosomal protein S12 n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9QZS7_CLOSW
30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_083_000G1_scaffold_111_10
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14264..14794
DNA (531bp) protein (177aa)
30S ribosomal protein S7 n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D874_9CLOT
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
ribosomal protein S7, bacterial/organelle
L3_083_000G1_scaffold_111_11
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14837..16954
DNA (2118bp) protein (706aa)
Elongation factor G n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6KLY8_9CLOT
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
translation elongation factor G
L3_083_000G1_scaffold_111_12
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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17063..18256
DNA (1194bp) protein (398aa)
Elongation factor Tu n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IL91_9CLOT
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
translation elongation factor Tu
L3_083_000G1_scaffold_111_13
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18383..19285
DNA (903bp) protein (301aa)
Uncharacterized protein n=6 Tax=Clostridium PF2_9CLOT">RepID=A8RPF2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ17175.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
hypothetical protein
L3_083_000G1_scaffold_111_14
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19224..20267)
DNA (1044bp) protein (348aa)
Acyltransferase n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BUP9_CLOSY
Acyltransferase {ECO:0000313|EMBL:ERI75543.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
hypothetical protein
L3_083_000G1_scaffold_111_15
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20443..22110
DNA (1668bp) protein (556aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HNM8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJJ68334.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
hypothetical protein
L3_083_000G1_scaffold_111_16
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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22289..22987
DNA (699bp) protein (233aa)
Putative N-acetylmannosamine-6-phosphate 2-epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; EC=5.1.3.9 {ECO:0000256|HAMAP-Rule:MF_01235};; ManNAc-6-P epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
N-acylglucosamine-6-phosphate 2-epimerase (EC:5.1.3.9)
Putative N-acetylmannosamine-6-phosphate 2-epimerase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I1T1_9FIRM
L3_083_000G1_scaffold_111_17
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22990..23865
DNA (876bp) protein (292aa)
glucokinase (EC:2.7.1.2)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IL85_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57773.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
L3_083_000G1_scaffold_111_18
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23950..24807
DNA (858bp) protein (286aa)
Transcriptional regulator n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5U303_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:CCZ63477.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
transcriptional regulator
L3_083_000G1_scaffold_111_19
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24835..25281
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B8 RepID=R0B9Z0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ45518.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
hypothetical protein
L3_083_000G1_scaffold_111_20
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25387..26304
DNA (918bp) protein (306aa)
N-acetylneuraminate lyase (EC:4.1.3.3)
Putative N-acetylneuraminate lyase n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D6S5_9CLOT
Putative N-acetylneuraminate lyase {ECO:0000313|EMBL:EEG52972.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
L3_083_000G1_scaffold_111_21
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

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26534..27922
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9J5N5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS29499.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
extracellular solute-binding protein
L3_083_000G1_scaffold_111_22
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

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28038..28943
DNA (906bp) protein (302aa)
Multiple sugar transport system permease n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9J5W0_9FIRM
Multiple sugar transport system permease {ECO:0000313|EMBL:EOS29498.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
ABC transporter permease
L3_083_000G1_scaffold_111_23
Mageeibacillus indolicus, Mageeibacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28955..29782
DNA (828bp) protein (276aa)
ABC transporter, permease protein n=1 Tax=Clostridiales genomosp. BVAB3 (strain UPII9-5) RepID=D3R0X9_CLOB3
ABC transporter permease
ABC transporter, permease protein {ECO:0000313|EMBL:ADC90979.1}; TaxID=699246 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Mageeibacillus.;" source="Mageeibacillus indolicus (strain UPII9-5) (Clostridiales genomosp.; BVAB3 (strain UPII9-5)).;"
L3_083_000G1_scaffold_111_24
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29942..31153
DNA (1212bp) protein (404aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
lysC; Aspartokinase (EC:2.7.2.4)
Aspartokinase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ELE2_9FIRM
L3_083_000G1_scaffold_111_25
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31170..31775
DNA (606bp) protein (202aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5ID62_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI60627.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
GntR family transcriptional regulator
L3_083_000G1_scaffold_111_26
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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31763..32410
DNA (648bp) protein (216aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5ID63_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI60628.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
hypothetical protein
L3_083_000G1_scaffold_111_27
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32634..33902
DNA (1269bp) protein (423aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5ID64_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI60629.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
anion transporter
L3_083_000G1_scaffold_111_28
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

33931..34830
DNA (900bp) protein (300aa)
hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region (EC:4.2.1.32)
Tartrate dehydratase subunit alpha n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6CF21_9FIRM
Tartrate dehydratase subunit alpha {ECO:0000313|EMBL:CDA63852.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
L3_083_000G1_scaffold_111_29
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34830..35456
DNA (627bp) protein (209aa)
hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region (EC:4.2.1.32)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IL38_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42858.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L3_083_000G1_scaffold_111_30
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35710..37161
DNA (1452bp) protein (484aa)
Uncharacterized protein n=4 Tax=Clostridium bolteae RepID=A8RPC5_9CLOT
Carboxyl transferase {ECO:0000313|EMBL:ENZ45390.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
carboxyl transferase
Displaying items 1-30 of 96 in total

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