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L3_083_000G1_scaffold_121

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Displaying items 1-30 of 132 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_000G1_scaffold_121_1
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..530)
DNA (528bp) protein (176aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease 3; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EV89_9FIRM
L3_083_000G1_scaffold_121_2
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(598..828)
DNA (231bp) protein (77aa)
Acyl carrier protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EV90_9FIRM
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
acyl carrier protein
L3_083_000G1_scaffold_121_3
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(847..1857)
DNA (1011bp) protein (337aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase {ECO:0000256|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; Phosphate-acyl-ACP acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Phosphate acyltransferase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IP28_9CLOT
fatty acid/phospholipid synthesis protein PlsX
L3_083_000G1_scaffold_121_4
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1960..2661)
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI00031D56CC
Uncharacterized protein {ECO:0000313|EMBL:EQB87919.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
NERD domain-containing protein
L3_083_000G1_scaffold_121_5
Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2700..3437)
DNA (738bp) protein (246aa)
PHP domain protein {ECO:0000313|EMBL:EFP63020.1}; EC=3.1.3.- {ECO:0000313|EMBL:EFP63020.1};; TaxID=658659 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 3_1_53.;"
PHP domain protein n=1 Tax=Erysipelotrichaceae bacterium 3_1_53 RepID=E2SHK0_9FIRM
phosphotransferase domain-containing protein
L3_083_000G1_scaffold_121_6
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3545..3811)
DNA (267bp) protein (89aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=D3AGK2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFC99067.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L3_083_000G1_scaffold_121_7
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3817..4896)
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AGK3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFC99068.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
membrane spanning protein
L3_083_000G1_scaffold_121_8
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5164..5997)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CUW0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG57159.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
acetyl esterase
L3_083_000G1_scaffold_121_9
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(6214..6396)
DNA (183bp) protein (61aa)
50S ribosomal protein L32 n=18 Tax=Clostridium RepID=A8RR58_9CLOT
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
ribosomal protein L32
L3_083_000G1_scaffold_121_10
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6400..6927)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IZ67_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42011.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_083_000G1_scaffold_121_11
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7003..8193)
DNA (1191bp) protein (397aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Acetate kinase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVA6_9FIRM
acetate kinase
L3_083_000G1_scaffold_121_12
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8219..8788)
DNA (570bp) protein (190aa)
Phosphate propanoyltransferase {ECO:0000256|PIRNR:PIRNR010130}; EC=2.3.1.222 {ECO:0000256|PIRNR:PIRNR010130};; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
Phosphate propanoyltransferase n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D055_9CLOT
propanediol utilization protein
L3_083_000G1_scaffold_121_13
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8998..9330)
DNA (333bp) protein (111aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HT20_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJJ71441.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
hypothetical protein
L3_083_000G1_scaffold_121_14
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9400..10830)
DNA (1431bp) protein (477aa)
Protease DegQ family protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EIF3_9FIRM
Protease DegQ family protein {ECO:0000313|EMBL:EEQ56383.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
peptidase S1 and S6 chymotrypsin/Hap
L3_083_000G1_scaffold_121_15
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10992..12266
DNA (1275bp) protein (425aa)
UPF0348 protein HMPREF9469_05730 n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HT18_9CLOT
UPF0348 protein CLFS41_28280 {ECO:0000256|HAMAP-Rule:MF_01539}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
hypothetical protein
L3_083_000G1_scaffold_121_16
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12253..13446)
DNA (1194bp) protein (398aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HT17_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJJ71438.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
hypothetical protein
L3_083_000G1_scaffold_121_17
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13458..14099)
DNA (642bp) protein (214aa)
Phosphoglycerate mutase n=2 Tax=Clostridium bolteae RepID=R0AKC3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP16790.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
phosphoglycerate mutase
L3_083_000G1_scaffold_121_18
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14298..15662)
DNA (1365bp) protein (455aa)
UPF0210 protein BN757_01960 n=1 Tax=Clostridium sp. CAG:7 RepID=R5IIH5_9CLOT
UPF0210 protein BN757_01960 {ECO:0000256|HAMAP-Rule:MF_01221}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_083_000G1_scaffold_121_19
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15689..15961)
DNA (273bp) protein (91aa)
UPF0237 protein CBFG_00098 n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EIF9_9FIRM
UPF0237 protein CBFG_00098 {ECO:0000256|HAMAP-Rule:MF_01054}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L3_083_000G1_scaffold_121_20
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16003..16800)
DNA (798bp) protein (266aa)
Putative metallo-hydrolase YycJ {ECO:0000313|EMBL:KJJ71433.1}; EC=3.-.-.- {ECO:0000313|EMBL:KJJ71433.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HT12_9CLOT
ribonuclease Z
L3_083_000G1_scaffold_121_21
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16808..17431)
DNA (624bp) protein (208aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase n=8 Tax=Clostridium clostridioforme RepID=G5I3Y2_9CLOT
L3_083_000G1_scaffold_121_22
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17468..20158)
DNA (2691bp) protein (897aa)
DNA polymerase I (EC:2.7.7.7)
DNA polymerase I n=2 Tax=Clostridium bolteae RepID=R0AKC6_9CLOT
DNA polymerase I {ECO:0000313|EMBL:ENZ52591.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
L3_083_000G1_scaffold_121_23
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20198..20530)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EIG3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ56393.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
transmembrane anti-sigma factor
L3_083_000G1_scaffold_121_24
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20829..21032)
DNA (204bp) protein (68aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=N9X6A6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP16814.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
L3_083_000G1_scaffold_121_25
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21238..22050
DNA (813bp) protein (271aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HBT0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJJ71381.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
hypothetical protein
L3_083_000G1_scaffold_121_26
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22141..22770
DNA (630bp) protein (210aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HBT2_9CLOT
L3_083_000G1_scaffold_121_27
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22821..23546)
DNA (726bp) protein (242aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HBT3_9CLOT
Bifunctional protein GlmU {ECO:0000313|EMBL:KJJ71378.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
UDP-N-acetylglucosamine pyrophosphorylase
L3_083_000G1_scaffold_121_28
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23550..25556)
DNA (2007bp) protein (669aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
DNA topoisomerase (EC:5.99.1.2)
DNA topoisomerase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IWL1_9CLOT
L3_083_000G1_scaffold_121_29
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25685..26746)
DNA (1062bp) protein (354aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
aldose 1-epimerase (EC:5.1.3.3)
Aldose 1-epimerase n=4 Tax=Clostridium bolteae RepID=A8RRB6_9CLOT
L3_083_000G1_scaffold_121_30
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26799..27884)
DNA (1086bp) protein (362aa)
aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HBT6_9CLOT
Aspartate-semialdehyde dehydrogenase {ECO:0000313|EMBL:EHF00816.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
Displaying items 1-30 of 132 in total

View Taxonomy