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L3_083_000G1_scaffold_187

Search features with annotation key words

Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_000G1_scaffold_187_1
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(228..1103)
DNA (876bp) protein (292aa)
AraC-type DNA-binding domain-containing proteins n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULF3_9FIRM
AraC-type DNA-binding domain-containing proteins {ECO:0000313|EMBL:CCZ79133.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
AraC-type DNA-binding domain-containing proteins
L3_083_000G1_scaffold_187_2
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1377..3629
DNA (2253bp) protein (751aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
glycogen/starch/alpha-glucan phosphorylases (EC:2.4.1.1)
Phosphorylase n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEI0_9FIRM
L3_083_000G1_scaffold_187_3
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3817..4998
DNA (1182bp) protein (394aa)
Basic membrane lipoprotein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V6P8_9FIRM
Basic membrane lipoprotein {ECO:0000313|EMBL:CCZ79131.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
basic membrane lipoprotein
L3_083_000G1_scaffold_187_4
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5008..6708
DNA (1701bp) protein (567aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Roseburia sp. CAG:100 RepID=R7R527_9FIRM
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:CDF45153.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
methyl-accepting chemotaxis sensory transducer
L3_083_000G1_scaffold_187_5
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6852..9266
DNA (2415bp) protein (805aa)
chitobiose phosphorylase (EC:2.4.1.-)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UM55_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79130.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L3_083_000G1_scaffold_187_6
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9279..11975
DNA (2697bp) protein (899aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UTV3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79129.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_083_000G1_scaffold_187_7
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11983..12720)
DNA (738bp) protein (246aa)
AraC-type DNA-binding domain-containing proteins n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULF0_9FIRM
AraC-type DNA-binding domain-containing proteins {ECO:0000313|EMBL:CCZ79128.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
AraC-type DNA-binding domain-containing proteins
L3_083_000G1_scaffold_187_8
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12857..14269
DNA (1413bp) protein (471aa)
Carbohydrate ABC transporter substrate-binding protein CUT1 family (TC 3.A.1.1.-) n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEH8_9FIRM
Carbohydrate ABC transporter substrate-binding protein CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CCZ79127.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L3_083_000G1_scaffold_187_9
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14360..15274
DNA (915bp) protein (305aa)
Carbohydrate ABC transporter membrane protein 1 CUT1 family (TC 3.A.1.1.-) n=1 Tax=Roseburia sp. CAG:18 RepID=R5V6P3_9FIRM
Carbohydrate ABC transporter membrane protein 1 CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CCZ79126.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
L3_083_000G1_scaffold_187_10
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15280..16143
DNA (864bp) protein (288aa)
Sugar ABC transporter permease n=1 Tax=Roseburia sp. CAG:18 RepID=R5UM52_9FIRM
Sugar ABC transporter permease {ECO:0000313|EMBL:CCZ79125.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
sugar ABC transporter permease
L3_083_000G1_scaffold_187_11
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16168..19671
DNA (3504bp) protein (1168aa)
Carbohydrate binding domain protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UTU9_9FIRM
Carbohydrate binding domain protein {ECO:0000313|EMBL:CCZ79124.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
laminarinase
L3_083_000G1_scaffold_187_12
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19814..21154
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULE6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79123.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L3_083_000G1_scaffold_187_13
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21181..22911
DNA (1731bp) protein (577aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEH5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79122.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Methyl-accepting chemotaxis protein
L3_083_000G1_scaffold_187_14
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22935..24770
DNA (1836bp) protein (612aa)
Diguanylate cyclase (GGDEF) domain n=1 Tax=Roseburia sp. CAG:18 RepID=R5V6N9_9FIRM
Diguanylate cyclase (GGDEF) domain {ECO:0000313|EMBL:CCZ79121.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
diguanylate cyclase (GGDEF) domain
L3_083_000G1_scaffold_187_15
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25047..26000
DNA (954bp) protein (318aa)
Tetratricopeptide repeat n=1 Tax=Roseburia sp. CAG:18 RepID=R5UTU4_9FIRM
Tetratricopeptide repeat {ECO:0000313|EMBL:CCZ79119.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Tetratricopeptide repeat.
L3_083_000G1_scaffold_187_16
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26000..27244
DNA (1245bp) protein (415aa)
GTPase HflX n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULE1_9FIRM
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
small GTP-binding protein domain protein
L3_083_000G1_scaffold_187_17
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27450..29819
DNA (2370bp) protein (790aa)
Probable phosphoketolase {ECO:0000256|HAMAP-Rule:MF_01403}; EC=4.1.2.- {ECO:0000256|HAMAP-Rule:MF_01403};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Phosphoketolase (EC:4.1.2.22)
Probable phosphoketolase n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEH1_9FIRM
L3_083_000G1_scaffold_187_18
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29829..30878)
DNA (1050bp) protein (350aa)
AraC-type DNA-binding domain-containing proteins n=1 Tax=Roseburia sp. CAG:18 RepID=R5V6N6_9FIRM
AraC-type DNA-binding domain-containing proteins {ECO:0000313|EMBL:CCZ79116.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
AraC-type DNA-binding domain-containing proteins
L3_083_000G1_scaffold_187_19
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30951..32795)
DNA (1845bp) protein (615aa)
GTP-binding protein TypA/BipA n=1 Tax=Roseburia sp. CAG:18 RepID=R5UM45_9FIRM
GTP-binding protein TypA/BipA {ECO:0000313|EMBL:CCZ79115.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
GTP-binding protein TypA/BipA
L3_083_000G1_scaffold_187_20
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33017..33643
DNA (627bp) protein (209aa)
Single-stranded DNA-binding protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UTU0_9FIRM
Single-stranded DNA-binding protein {ECO:0000313|EMBL:CCZ79114.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Single-stranded DNA-binding protein
L3_083_000G1_scaffold_187_21
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33717..34202
DNA (486bp) protein (162aa)
ATP:corrinoid adenosyltransferase (EC:2.5.1.17)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULD6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79113.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L3_083_000G1_scaffold_187_22
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34489..35376
DNA (888bp) protein (296aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEG9_9FIRM
L3_083_000G1_scaffold_187_23
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35398..36159
DNA (762bp) protein (254aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
dihydrodipicolinate reductase (EC:1.3.1.26)
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Roseburia sp. CAG:18 RepID=R5V6N1_9FIRM
L3_083_000G1_scaffold_187_24
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36274..38049
DNA (1776bp) protein (592aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UM41_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79110.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_083_000G1_scaffold_187_25
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38065..39351
DNA (1287bp) protein (429aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Dihydroorotase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UTT6_9FIRM
dihydroorotase
L3_083_000G1_scaffold_187_26
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39377..40309
DNA (933bp) protein (311aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
orotidine 5'-phosphate decarboxylase, subfamily 2 (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULD3_9FIRM
L3_083_000G1_scaffold_187_27
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40352..41143
DNA (792bp) protein (264aa)
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEG5_9FIRM
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; Dihydroorotate oxidase B, electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases
L3_083_000G1_scaffold_187_28
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

41143..42048
DNA (906bp) protein (302aa)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
dihydroorotate dehydrogenase (subfamily 1) family protein (EC:1.3.98.1)
Dihydroorotate dehydrogenase n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FU28_9FIRM
L3_083_000G1_scaffold_187_29
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

42479..43159
DNA (681bp) protein (227aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Orotate phosphoribosyltransferase n=1 Tax=Roseburia sp. CAG:18 RepID=R5V6M7_9FIRM
pyrE; orotate phosphoribosyltransferase
L3_083_000G1_scaffold_187_30
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

43190..43516
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UM36_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79105.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
Displaying items 1-30 of 73 in total

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