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L3_083_000G1_scaffold_226

Search features with annotation key words

Displaying items 1-30 of 79 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_000G1_scaffold_226_1
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..1415)
DNA (1413bp) protein (471aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008788}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
GMP synthase large subunit (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JZB1_9CLOT
L3_083_000G1_scaffold_226_2
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1854..3326
DNA (1473bp) protein (491aa)
Putative signaling protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZCV4_9CLOT
Putative signaling protein {ECO:0000313|EMBL:CDD41319.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
signaling protein
L3_083_000G1_scaffold_226_3
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3426..4343
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7W8M7_DESOD
dehydrogenase
Uncharacterized protein {ECO:0000313|EMBL:AET67454.1}; TaxID=768706 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 /; VKM B-1628) (Desulfotomaculum orientis).;"
L3_083_000G1_scaffold_226_4
unknown

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4697..4861
DNA (165bp) protein (55aa)

This feature has no annotations

L3_083_000G1_scaffold_226_5
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4869..5627
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TYS4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ58105.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
carboxymuconolactone decarboxylase family protein
L3_083_000G1_scaffold_226_6
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5648..6172
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Clostridium sp. M62/1 RepID=D4C6K1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFE14189.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
hypothetical protein
L3_083_000G1_scaffold_226_7
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6253..7179
DNA (927bp) protein (309aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HEG5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF00213.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
LysR family transcriptional regulator
L3_083_000G1_scaffold_226_8
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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7205..8179
DNA (975bp) protein (325aa)
Aldo/keto reductase n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XGR5_9CLOT
Aldo/keto reductase {ECO:0000313|EMBL:ENY98892.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
aryl-alcohol dehydrogenase
L3_083_000G1_scaffold_226_9
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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8345..9055
DNA (711bp) protein (237aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IN76_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57047.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
LytTR family two component transcriptional regulator
L3_083_000G1_scaffold_226_10
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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9052..10365
DNA (1314bp) protein (438aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IN75_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57046.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
virS; two-component sensor kinase VirS
L3_083_000G1_scaffold_226_11
Lachnospiraceae bacterium TWA4, Clostridiales, Clostridia, Firmicutes, Bacteria

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10476..11636
DNA (1161bp) protein (387aa)
Alcohol dehydrogenase (NADP(+)) n=1 Tax=Clostridium sp. DL-VIII RepID=G7LXT6_9CLOT
TWA4_scaffold00001, whole genome shotgun sequence {ECO:0000313|EMBL:KIR03685.1}; TaxID=1392836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium TWA4.;"
Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family
L3_083_000G1_scaffold_226_12
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11925..12998
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J5F4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44137.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Transglutaminase-like superfamily.
L3_083_000G1_scaffold_226_13
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12985..14853
DNA (1869bp) protein (623aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5F3Z6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX99780.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
ATP-dependent DNA helicase RecQ
L3_083_000G1_scaffold_226_14
unknown

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14817..14909
DNA (93bp) protein (31aa)

This feature has no annotations

L3_083_000G1_scaffold_226_15
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14933..16042
DNA (1110bp) protein (370aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
S-adenosyl-methyltransferase MraW (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Clostridium sp. CAG:7 RepID=R5IL72_9CLOT
L3_083_000G1_scaffold_226_16
Bacteroides pectinophilus CAG:437, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16082..16519)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Bacteroides pectinophilus CAG:437 RepID=R7ADA2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD58778.1}; TaxID=1263051 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides pectinophilus CAG:437.;"
hypothetical protein
L3_083_000G1_scaffold_226_17
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16610..18502)
DNA (1893bp) protein (631aa)
ABC transporter ATP-binding protein/permease n=1 Tax=Clostridium bolteae 90B8 RepID=R0B981_9CLOT
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJJ72541.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
ATP-binding cassette subfamily B protein
L3_083_000G1_scaffold_226_18
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18502..20226)
DNA (1725bp) protein (575aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HPW2_9CLOT
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJJ72540.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
ABC transporter
L3_083_000G1_scaffold_226_19
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20796..21551
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ILB5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42895.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_083_000G1_scaffold_226_20
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21681..22637
DNA (957bp) protein (319aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
[LSU ribosomal protein L11P]-lysine N-methyltransferase (EC:2.1.1.-)
Ribosomal protein L11 methyltransferase n=1 Tax=Clostridium sp. CAG:7 RepID=R5J1J0_9CLOT
L3_083_000G1_scaffold_226_21
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22642..23391
DNA (750bp) protein (250aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
RNA methyltransferase, RsmE family (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Clostridium sp. CAG:7 RepID=R5IL79_9CLOT
L3_083_000G1_scaffold_226_22
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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23405..24559
DNA (1155bp) protein (385aa)
cysteine desulfurase (EC:2.8.1.7)
Aminotransferase, class V n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHU3_9FIRM
Aminotransferase, class V {ECO:0000313|EMBL:EEQ57778.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
L3_083_000G1_scaffold_226_23
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24649..25830
DNA (1182bp) protein (394aa)
Probable tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094284}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; Thiamine biosynthesis protein ThiI {ECO:0000256|HAMAP-Rule:MF_00021}; tRNA 4-thiouridine synthase {ECO:0000256|HAMAP-Rule:MF_00021}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Probable tRNA sulfurtransferase n=1 Tax=Clostridium sp. CAG:7 RepID=R5J1J6_9CLOT
thiamine biosynthesis/tRNA modification protein ThiI
L3_083_000G1_scaffold_226_24
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25883..26116)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IL85_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42903.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
PTS HPr component phosphorylation site.
L3_083_000G1_scaffold_226_25
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26285..27646
DNA (1362bp) protein (454aa)
MiaB-like tRNA modifying enzyme (EC:1.3.1.74)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ILC5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42905.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L3_083_000G1_scaffold_226_26
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27756..28016
DNA (261bp) protein (87aa)
UPF0297 protein HMPREF9469_04615 n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HPV3_9CLOT
UPF0297 protein CLFS41_23000 {ECO:0000256|HAMAP-Rule:MF_01507}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
hypothetical protein
L3_083_000G1_scaffold_226_27
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28291..28761
DNA (471bp) protein (157aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Putative Holliday junction resolvase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IL91_9CLOT
conserved hypothetical protein TIGR00250
L3_083_000G1_scaffold_226_28
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28739..29041
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ILD0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42910.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_083_000G1_scaffold_226_29
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29058..31133
DNA (2076bp) protein (692aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J1K6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42911.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
RNA-metabolising metallo-beta-lactamase
L3_083_000G1_scaffold_226_30
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31182..31817
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IL96_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42913.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
aminodeoxychorismate lyase
Displaying items 1-30 of 79 in total

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