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L3_083_000G1_scaffold_309

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Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_000G1_scaffold_309_1
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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215..1324
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IN68_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43593.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_083_000G1_scaffold_309_2
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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1418..2035
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K3K9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN31953.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
transcriptional regulator, TetR family
L3_083_000G1_scaffold_309_3
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2118..3893
DNA (1776bp) protein (592aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MFT9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS69939.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
ABC-type multidrug transport system, ATPase and permease components
L3_083_000G1_scaffold_309_4
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3890..5620
DNA (1731bp) protein (577aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EET8_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEG30057.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
ABC-type multidrug transport system, ATPase and permease components
L3_083_000G1_scaffold_309_5
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5667..7556)
DNA (1890bp) protein (630aa)
Uncharacterized protein n=8 Tax=Clostridium clostridioforme RepID=N9VZ44_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ65493.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L3_083_000G1_scaffold_309_6
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7562..8632)
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JZ38_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB63041.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
DNA repair exonuclease
L3_083_000G1_scaffold_309_7
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8829..10220)
DNA (1392bp) protein (464aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparagine--tRNA ligase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IMK7_9CLOT
L3_083_000G1_scaffold_309_8
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10554..11828
DNA (1275bp) protein (425aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
glucose-1-phosphate adenylyltransferase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase n=1 Tax=Clostridium sp. CAG:7 RepID=R5ISQ4_9CLOT
L3_083_000G1_scaffold_309_9
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11825..12946
DNA (1122bp) protein (374aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|SAAS:SAAS00083544}; EC=2.7.7.27 {ECO:0000256|SAAS:SAAS00083544};; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
ADP-glucose pyrophosphorylase (EC:2.7.7.27)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JJK4_9CLOT
L3_083_000G1_scaffold_309_10
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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13070..13303
DNA (234bp) protein (78aa)
Putative septation protein SpoVG n=8 Tax=Clostridiales RepID=A8RIP1_9CLOT
Putative septation protein SpoVG {ECO:0000256|HAMAP-Rule:MF_00819}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
SpoVG family protein
L3_083_000G1_scaffold_309_11
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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13830..15290
DNA (1461bp) protein (487aa)
arginine decarboxylase (EC:4.1.1.19)
Orn/Lys/Arg decarboxylase, major domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSC9_9FIRM
Orn/Lys/Arg decarboxylase, major domain protein {ECO:0000313|EMBL:EFB74414.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L3_083_000G1_scaffold_309_12
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15308..16165
DNA (858bp) protein (286aa)
spermidine synthase (EC:2.5.1.16)
Spermidine synthase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSD0_9FIRM
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L3_083_000G1_scaffold_309_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16165..16881
DNA (717bp) protein (239aa)
Agmatinase {ECO:0000313|EMBL:EDP21555.1}; EC=3.5.3.11 {ECO:0000313|EMBL:EDP21555.1};; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
agmatinase (EC:3.5.3.11)
Agmatinase n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAH7_9FIRM
L3_083_000G1_scaffold_309_14
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16894..18153
DNA (1260bp) protein (420aa)
Saccharopine dehydrogenase {ECO:0000313|EMBL:EFB74417.1}; EC=1.5.1.7 {ECO:0000313|EMBL:EFB74417.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
carboxynorspermidine dehydrogenase (EC:1.5.1.7)
Saccharopine dehydrogenase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSD2_9FIRM
L3_083_000G1_scaffold_309_15
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18368..19303
DNA (936bp) protein (312aa)
carboxynorspermidine decarboxylase (EC:4.1.1.-)
Putative carboxynorspermidine decarboxylase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSD3_9FIRM
Putative carboxynorspermidine decarboxylase {ECO:0000313|EMBL:EFB74418.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L3_083_000G1_scaffold_309_16
Cellulosilyticum ruminicola, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19300..20748)
DNA (1449bp) protein (483aa)
Glucosidase (Fragment) n=1 Tax=Cellulosilyticum ruminicola RepID=D2KFL3_9FIRM
Glucosidase {ECO:0000313|EMBL:ACZ98615.1}; Flags: Fragment;; TaxID=425254 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum ruminicola.;"
glycosyl hydrolase
L3_083_000G1_scaffold_309_17
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20768..22684)
DNA (1917bp) protein (639aa)
PTS system beta-glucoside-specific transporter subunit IIABC (EC:2.7.1.69)
PTS system beta-glucoside-specific IIABC component n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5SZM7_9CLOT
PTS system beta-glucoside-specific IIABC component {ECO:0000313|EMBL:CCZ58723.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
L3_083_000G1_scaffold_309_18
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22870..23715)
DNA (846bp) protein (282aa)
Transcriptional antiterminator, BglG n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JK88_CELLD
transcriptional antiterminator BglG
Transcriptional antiterminator, BglG {ECO:0000313|EMBL:ADZ85603.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_083_000G1_scaffold_309_19
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24094..26004
DNA (1911bp) protein (637aa)
transcriptional antiterminator BglG (EC:2.7.1.69)
Transcriptional antiterminator, BglG {ECO:0000313|EMBL:ADL03070.1}; EC=2.7.1.69 {ECO:0000313|EMBL:ADL03070.1};; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
Transcriptional antiterminator, BglG n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R3V7_CLOSW
L3_083_000G1_scaffold_309_20
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26075..26398
DNA (324bp) protein (108aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HDL6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF00500.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
PTS system protein
L3_083_000G1_scaffold_309_21
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

26404..27639
DNA (1236bp) protein (412aa)
PTS system, lactose/cellobiose family IIC component n=5 Tax=Firmicutes RepID=E4LTL2_9CLOT
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
celB; PTS system, IIC component
L3_083_000G1_scaffold_309_22
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

27727..28068
DNA (342bp) protein (114aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1BHB6_9FIRM
PTS cellobiose transporter subunit IIA {ECO:0000313|EMBL:KGJ52813.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
PTS system lactose/cellobiose-specific transporter subunit IIA
L3_083_000G1_scaffold_309_23
Xenorhabdus cabanillasii, Xenorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28079..29533
DNA (1455bp) protein (485aa)
Aryl-phospho-beta-D-glucosidase BglC {ECO:0000313|EMBL:CDL86824.1}; EC=3.2.1.86 {ECO:0000313|EMBL:CDL86824.1};; TaxID=1427517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Xenorhabdus.;" source="Xenorhabdus cabanillasii JM26.;"
bglC; Aryl-phospho-beta-D-glucosidase bglC (EC:3.2.1.86)
Putative aryl-phospho-beta-D-glucosidase BglC n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DJW8_CLOS4
L3_083_000G1_scaffold_309_24
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29596..30999)
DNA (1404bp) protein (468aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EM71_9FIRM
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EEQ59039.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Uncharacterized FAD-dependent dehydrogenases
L3_083_000G1_scaffold_309_25
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31163..32524)
DNA (1362bp) protein (454aa)
MATE efflux family protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q628_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CDC28464.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
MATE efflux family protein
L3_083_000G1_scaffold_309_26
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32767..33495
DNA (729bp) protein (243aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J319_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43322.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L3_083_000G1_scaffold_309_27
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33663..34235
DNA (573bp) protein (191aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Clostridium sp. CAG:7 RepID=R5J2Q1_9CLOT
L3_083_000G1_scaffold_309_28
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34238..37804
DNA (3567bp) protein (1189aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Transcription-repair-coupling factor n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9XNL9_9CLOT
transcription-repair coupling factor
L3_083_000G1_scaffold_309_29
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37951..39903
DNA (1953bp) protein (651aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J314_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43317.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
basic membrane lipoprotein
L3_083_000G1_scaffold_309_30
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39905..40507
DNA (603bp) protein (201aa)
Metallophosphoesterase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IMD9_9CLOT
Metallophosphoesterase {ECO:0000313|EMBL:CCY43313.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
metallophosphoesterase
Displaying items 1-30 of 73 in total

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