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L3_083_000G1_scaffold_335

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_000G1_scaffold_335_1
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..1997)
DNA (1995bp) protein (665aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XHE7_9FIRM
two-component system signal transduction histidine kinase
L3_083_000G1_scaffold_335_2
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1998..2693)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XHE8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45434.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
response regulator
L3_083_000G1_scaffold_335_3
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2891..3274)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9G0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48207.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Predicted thioesterase
L3_083_000G1_scaffold_335_4
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3463..4359
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9G2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48209.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
eamA-like transporter family protein
L3_083_000G1_scaffold_335_5
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(4432..5817)
DNA (1386bp) protein (462aa)
gltD; glutamate synthase (NADPH/NADH) small chain (EC:1.4.1.13 1.4.1.14)
Glutamate synthase (NADPH), homotetrameric n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YEQ6_9FIRM
Glutamate synthase (NADPH), homotetrameric {ECO:0000313|EMBL:ESL13666.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
L3_083_000G1_scaffold_335_6
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(5810..6667)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2ZGX9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13665.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L3_083_000G1_scaffold_335_7
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(6779..8731)
DNA (1953bp) protein (651aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2XVJ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13664.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases
L3_083_000G1_scaffold_335_8
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

8995..9378
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2XST3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL12714.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
L3_083_000G1_scaffold_335_9
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9368..10366)
DNA (999bp) protein (333aa)
L-asparaginase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9G4_9FIRM
L-asparaginase {ECO:0000313|EMBL:EGJ48211.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
type I L-asparaginase
L3_083_000G1_scaffold_335_10
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10447..11193)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9G5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48212.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_083_000G1_scaffold_335_11
unknown

Not on your lists

11302..11415
DNA (114bp) protein (38aa)

This feature has no annotations

L3_083_000G1_scaffold_335_12
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11514..12371)
DNA (858bp) protein (286aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9G6_9FIRM
glucose-1-phosphate thymidylyltransferase
L3_083_000G1_scaffold_335_13
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12548..16168)
DNA (3621bp) protein (1207aa)
ATP-dependent helicase/nuclease subunit A {ECO:0000256|SAAS:SAAS00044589}; EC=3.1.-.- {ECO:0000256|SAAS:SAAS00274943};; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
addA; ATP-dependent nuclease subunit A (EC:3.6.1.-)
ATP-dependent helicase/nuclease subunit A n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9C0_9FIRM
L3_083_000G1_scaffold_335_14
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16192..18486)
DNA (2295bp) protein (765aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9D3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48180.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_083_000G1_scaffold_335_15
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

18679..19311
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DAQ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81266.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hypothetical protein
L3_083_000G1_scaffold_335_16
unknown

Not on your lists

comp(19423..19740)
DNA (318bp) protein (106aa)

This feature has no annotations

L3_083_000G1_scaffold_335_17
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19757..20611)
DNA (855bp) protein (285aa)
putative metallophosphoesterase (EC:3.1.-.-)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAD9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47317.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_083_000G1_scaffold_335_18
Brevibacillus panacihumi, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20613..20921)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Brevibacillus panacihumi W25 RepID=V6M497_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EST53137.1}; TaxID=1408254 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus panacihumi W25.;"
L3_083_000G1_scaffold_335_19
unknown

Not on your lists

comp(20967..21560)
DNA (594bp) protein (198aa)

This feature has no annotations

L3_083_000G1_scaffold_335_20
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21564..21938)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAD8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47316.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_083_000G1_scaffold_335_21
unknown

Not on your lists

comp(21968..22543)
DNA (576bp) protein (192aa)

This feature has no annotations

L3_083_000G1_scaffold_335_22
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22540..22752)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAD3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47311.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
transcriptional regulator
L3_083_000G1_scaffold_335_23
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(22769..23374)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2XUW9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13484.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
L3_083_000G1_scaffold_335_24
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23516..24076)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAD1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47309.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Predicted metal-dependent hydrolase
L3_083_000G1_scaffold_335_25
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24144..24770)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9G8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48215.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_083_000G1_scaffold_335_26
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24754..25299)
DNA (546bp) protein (182aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Ruminococcaceae bacterium D16 RepID=T5RVI2_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EQN60562.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
RNA polymerase sigma factor
L3_083_000G1_scaffold_335_27
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(25461..27458)
DNA (1998bp) protein (666aa)
Oxaloacetate decarboxylase alpha subunit n=1 Tax=Firmicutes bacterium ASF500 RepID=V2Y0Q3_9FIRM
Oxaloacetate decarboxylase alpha subunit {ECO:0000313|EMBL:ESL15554.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L3_083_000G1_scaffold_335_28
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27770..27901)
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9H2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48219.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_083_000G1_scaffold_335_29
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28409..30619)
DNA (2211bp) protein (737aa)
Polysaccharide pyruvyl transferase CsaB n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XE18_9FIRM
Polysaccharide pyruvyl transferase CsaB {ECO:0000313|EMBL:EGJ47064.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
polysaccharide pyruvyl transferase CsaB
L3_083_000G1_scaffold_335_30
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30627..31130)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XE17_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47063.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Displaying items 1-30 of 63 in total

View Taxonomy