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L3_083_000G1_scaffold_438

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_000G1_scaffold_438_1
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(183..1202)
DNA (1020bp) protein (340aa)
Endonuclease/exonuclease/phosphatase family protein n=2 Tax=Bacteroides caccae RepID=A5ZIW8_9BACE
Endonuclease/exonuclease/phosphatase family protein {ECO:0000313|EMBL:EDM20093.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_083_000G1_scaffold_438_2
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1261..2721)
DNA (1461bp) protein (487aa)
aminoacyl-histidine dipeptidase (EC:3.4.13.3)
Aminoacyl-histidine dipeptidase n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8UZ78_9BACE
Aminoacyl-histidine dipeptidase {ECO:0000313|EMBL:EIY19510.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L3_083_000G1_scaffold_438_3
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2855..3088
DNA (234bp) protein (78aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A5ZIX0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74949.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L3_083_000G1_scaffold_438_4
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3127..3723
DNA (597bp) protein (199aa)
Outer membrane protein n=3 Tax=Bacteroides RepID=A5ZIX1_9BACE
Outer membrane protein {ECO:0000313|EMBL:EDM20096.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Outer membrane protein (OmpH-like).
L3_083_000G1_scaffold_438_5
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3828..4169)
DNA (342bp) protein (114aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZIX2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY19507.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_083_000G1_scaffold_438_6
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4173..4469)
DNA (297bp) protein (99aa)
Septum formation initiator n=3 Tax=Bacteroides RepID=A5ZIX3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74952.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Septum formation initiator.
L3_083_000G1_scaffold_438_7
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4617..6473
DNA (1857bp) protein (619aa)
DNA polymerase III, tau subunit (EC:2.7.7.7)
DNA polymerase III subunit gamma and tau n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U9V4_9BACE
DNA polymerase III subunit gamma and tau {ECO:0000313|EMBL:CCZ74953.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L3_083_000G1_scaffold_438_8
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6579..6818)
DNA (240bp) protein (80aa)
PspC domain protein n=3 Tax=Bacteroides RepID=A5ZIX5_9BACE
PspC domain protein {ECO:0000313|EMBL:EDM20101.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Putative stress-responsive transcriptional regulator
L3_083_000G1_scaffold_438_9
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7035..8189)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=I9PSX9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY19503.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
capsule biosynthesis protein capA
L3_083_000G1_scaffold_438_10
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8186..9067)
DNA (882bp) protein (294aa)
methenyltetrahydrofolate cyclohydrolase/5,10-methylenetetrahydrofolate dehydrogenase (NADP+) (EC:1.5.1.5 3.5.4.9)
Bifunctional protein FolD n=3 Tax=Bacteroides RepID=A5ZIX8_9BACE
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L3_083_000G1_scaffold_438_11
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9270..10655)
DNA (1386bp) protein (462aa)
Di-heme cytochrome C peroxidase n=3 Tax=Bacteroides RepID=A5ZIX9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY19501.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
cytochrome C peroxidase
L3_083_000G1_scaffold_438_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10676..11461)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8UZ67_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY19500.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
cytochrome c biogenesis protein
L3_083_000G1_scaffold_438_13
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11445..12323)
DNA (879bp) protein (293aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=I9EHE2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY19499.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_083_000G1_scaffold_438_14
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(12550..13872)
DNA (1323bp) protein (441aa)
Signal recognition particle protein n=3 Tax=Bacteroides RepID=A5ZIY2_9BACE
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
signal recognition particle subunit FFH/SRP54 (srp54)
L3_083_000G1_scaffold_438_15
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13931..15253)
DNA (1323bp) protein (441aa)
MATE efflux family protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZIY3_9BACE
MATE efflux family protein {ECO:0000313|EMBL:EDM20108.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
putative antiporter membrane protein
L3_083_000G1_scaffold_438_16
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15292..17256)
DNA (1965bp) protein (655aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PSB5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY19496.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
two-component system sensor histidine kinase
L3_083_000G1_scaffold_438_17
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17253..19103)
DNA (1851bp) protein (617aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=I8UZ60_9BACE
two-component system sensor histidine kinase
L3_083_000G1_scaffold_438_18
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19185..20651)
DNA (1467bp) protein (489aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9EHD7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY19494.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Arylsulfatase A and related enzymes
L3_083_000G1_scaffold_438_19
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20638..20823)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PSX3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY19493.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L3_083_000G1_scaffold_438_20
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20860..23058)
DNA (2199bp) protein (733aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Transcription termination factor Rho n=2 Tax=Bacteroides caccae RepID=A5ZIY7_9BACE
transcription termination factor Rho
L3_083_000G1_scaffold_438_21
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23294..24130
DNA (837bp) protein (279aa)
4Fe-4S binding domain protein n=2 Tax=Bacteroides RepID=A5ZIY8_9BACE
4Fe-4S binding domain protein {ECO:0000313|EMBL:CCZ74966.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
4Fe-4S binding domain.
L3_083_000G1_scaffold_438_22
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24115..25395)
DNA (1281bp) protein (427aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
tRNA(Ile)-lysidine synthase n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZIY9_9BACE
cell-cycle protein
L3_083_000G1_scaffold_438_23
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25593..28079
DNA (2487bp) protein (829aa)
Ferrous iron transporter B n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9EHD0_9BACE
Ferrous iron transporter B {ECO:0000313|EMBL:EIY19489.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
ferrous iron transport protein
L3_083_000G1_scaffold_438_24
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28076..28291
DNA (216bp) protein (72aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZIZ1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM20116.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_083_000G1_scaffold_438_25
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28690..29568
DNA (879bp) protein (293aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=I8V2K3_9BACE
Putative membrane protein {ECO:0000313|EMBL:EDM20117.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Predicted permeases
L3_083_000G1_scaffold_438_26
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29648..29983
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8V340_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY19702.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
transposase
L3_083_000G1_scaffold_438_27
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29929..31617)
DNA (1689bp) protein (563aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZIZ3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM20118.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L3_083_000G1_scaffold_438_28
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31581..32117)
DNA (537bp) protein (179aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=I8UZT5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY19700.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L3_083_000G1_scaffold_438_29
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32132..32800)
DNA (669bp) protein (223aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9EHX4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72724.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L3_083_000G1_scaffold_438_30
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32815..33132)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U3Q7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72723.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Displaying items 1-30 of 51 in total

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