ggKbase home page

L3_083_000G1_scaffold_482

Search features with annotation key words

Displaying items 1-30 of 78 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_000G1_scaffold_482_1
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

97..993
DNA (897bp) protein (299aa)
Transcriptional regulator, LysR family n=4 Tax=Clostridium RepID=U2D2P1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95773.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
transcriptional regulator, LysR family
L3_083_000G1_scaffold_482_2
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1231..2394
DNA (1164bp) protein (388aa)
Rubredoxin-oxygen oxidoreductase n=2 Tax=Clostridium symbiosum RepID=E7GHE1_CLOSY
Rubredoxin-oxygen oxidoreductase {ECO:0000313|EMBL:EGA95774.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Uncharacterized flavoproteins
L3_083_000G1_scaffold_482_3
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2563..3576)
DNA (1014bp) protein (338aa)
Putative uncharacterized protein n=2 Tax=Clostridium RepID=G5FE81_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF05259.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
DNA-binding domain-containing protein
L3_083_000G1_scaffold_482_4
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3640..6795)
DNA (3156bp) protein (1052aa)
Glycosyltransferase, group 2 family protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SJK2_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95776.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Predicted glycosyltransferases
L3_083_000G1_scaffold_482_5
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6802..7614)
DNA (813bp) protein (271aa)
Glycosyl transferase n=3 Tax=Clostridium symbiosum RepID=E7GHE4_CLOSY
Glycosyl transferase {ECO:0000313|EMBL:EGA95777.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_083_000G1_scaffold_482_6
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7640..9001)
DNA (1362bp) protein (454aa)
ABC transporter, ATP-binding protein n=4 Tax=Clostridium RepID=E9SJK0_CLOSY
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI75727.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
ABC-type polysaccharide/polyol phosphate transport system, ATPase component
L3_083_000G1_scaffold_482_7
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9656..10498)
DNA (843bp) protein (281aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FE85_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF05263.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L3_083_000G1_scaffold_482_8
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10517..11770)
DNA (1254bp) protein (418aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FE86_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF05264.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
citrate transporter family protein
L3_083_000G1_scaffold_482_9
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12012..12944)
DNA (933bp) protein (311aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FE87_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF05265.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L3_083_000G1_scaffold_482_10
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12934..13437)
DNA (504bp) protein (168aa)
RNA polymerase sigma factor SigX n=2 Tax=Clostridium symbiosum RepID=E7GHE9_CLOSY
RNA polymerase sigma factor SigX {ECO:0000313|EMBL:EGA95782.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
DNA-directed RNA polymerase subunit sigma
L3_083_000G1_scaffold_482_11
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13555..15732)
DNA (2178bp) protein (726aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SJJ5_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95783.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Signal transduction histidine kinase
L3_083_000G1_scaffold_482_12
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16155..16619
DNA (465bp) protein (155aa)
Methylglyoxal synthase {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089917}; Short=MGS {ECO:0000256|HAMAP-Rule:MF_00549};; EC=4.2.3.3 {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089921};; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
methylglyoxal synthase (EC:4.2.3.3)
Methylglyoxal synthase n=4 Tax=Clostridium RepID=E7GHF1_CLOSY
L3_083_000G1_scaffold_482_13
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16698..17042
DNA (345bp) protein (115aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=E9SJJ3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05269.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L3_083_000G1_scaffold_482_14
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17035..17436
DNA (402bp) protein (134aa)
Putative uncharacterized protein n=2 Tax=Clostridium RepID=E7GHF3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95786.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_083_000G1_scaffold_482_15
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17727..17870
DNA (144bp) protein (48aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R6GKP6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC14347.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L3_083_000G1_scaffold_482_16
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18141..19628
DNA (1488bp) protein (496aa)
anthranilate synthase, component I (EC:4.1.3.27)
Anthranilate synthase component I n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BCD1_CLOSY
Anthranilate synthase component I {ECO:0000313|EMBL:ERI75789.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L3_083_000G1_scaffold_482_17
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19625..20194
DNA (570bp) protein (190aa)
trpG; putative anthranilate synthase component II (EC:4.1.3.27)
Glutamine amidotransferase, class I n=2 Tax=Clostridium symbiosum RepID=E9SJJ0_CLOSY
Para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II {ECO:0000313|EMBL:ERI75788.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L3_083_000G1_scaffold_482_18
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20366..21376
DNA (1011bp) protein (337aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
anthranilate phosphoribosyltransferase (EC:2.4.2.18)
Anthranilate phosphoribosyltransferase n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SJI9_CLOSY
L3_083_000G1_scaffold_482_19
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21388..22197
DNA (810bp) protein (270aa)
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046689}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046705};; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
indole-3-glycerol phosphate synthase (EC:4.1.1.48)
Indole-3-glycerol phosphate synthase n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SJI8_CLOSY
L3_083_000G1_scaffold_482_20
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22194..22805
DNA (612bp) protein (204aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123176};; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
phosphoribosylanthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase n=3 Tax=Clostridium RepID=E7GHF8_CLOSY
L3_083_000G1_scaffold_482_21
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22802..23986
DNA (1185bp) protein (395aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
tryptophan synthase, beta subunit (EC:4.2.1.20)
Tryptophan synthase beta chain n=2 Tax=Clostridium symbiosum RepID=E7GHF9_CLOSY
L3_083_000G1_scaffold_482_22
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23979..24764
DNA (786bp) protein (262aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601};; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
tryptophan synthase, alpha chain (EC:4.2.1.20)
Tryptophan synthase alpha chain n=2 Tax=Clostridium symbiosum RepID=E7GHG0_CLOSY
L3_083_000G1_scaffold_482_23
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24907..25143)
DNA (237bp) protein (79aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=E9SJI4_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05278.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L3_083_000G1_scaffold_482_24
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25336..26151)
DNA (816bp) protein (272aa)
ABC-2 type transporter n=2 Tax=Clostridium symbiosum RepID=E9SJI3_CLOSY
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
ABC-type polysaccharide/polyol phosphate export systems, permease component
L3_083_000G1_scaffold_482_25
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26222..26782)
DNA (561bp) protein (187aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase n=4 Tax=Clostridium RepID=U2DGX8_CLOSY
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:EHF05280.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L3_083_000G1_scaffold_482_26
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27269..27667)
DNA (399bp) protein (133aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=E9SJI1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95797.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_083_000G1_scaffold_482_27
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27671..28360)
DNA (690bp) protein (230aa)
Glycosyltransferase, group 2 family protein n=4 Tax=Clostridium RepID=E9SJI0_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05173.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Glycosyltransferases involved in cell wall biogenesis
L3_083_000G1_scaffold_482_28
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28440..29399)
DNA (960bp) protein (320aa)
Glycosyltransferase, group 2 family protein n=2 Tax=Clostridium symbiosum RepID=U2D0U3_CLOSY
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:ERI75077.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Glycosyltransferases, probably involved in cell wall biogenesis
L3_083_000G1_scaffold_482_29
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29562..30425)
DNA (864bp) protein (288aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=U2D6B7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI75076.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Glycosyl transferase family 2.
L3_083_000G1_scaffold_482_30
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30453..32426)
DNA (1974bp) protein (658aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GHG8_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95801.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
Displaying items 1-30 of 78 in total

View Taxonomy