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L3_083_000G1_scaffold_485

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_000G1_scaffold_485_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..331)
DNA (330bp) protein (110aa)
CBS domain protein n=218 Tax=Clostridium difficile RepID=C9XS68_CLODC
uncharacterised CBS domain protein
CBS domain protein {ECO:0000313|EMBL:EQE58830.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_083_000G1_scaffold_485_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(344..724)
DNA (381bp) protein (127aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237208}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237180};; 4'-phosphopantetheinyl transferase AcpS {ECO:0000256|HAMAP-Rule:MF_00101}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
acpS; 4'-phosphopantetheinyl transferase (EC:2.7.8.7)
Holo-[acyl-carrier-protein] synthase n=1 Tax=Clostridium difficile CD160 RepID=T3D896_CLODI
L3_083_000G1_scaffold_485_3
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1060..2472)
DNA (1413bp) protein (471aa)
H+ symporter family protein n=2 Tax=Clostridium sordellii RepID=T0D7N8_CLOSO
Amino acid/peptide transporter {ECO:0000313|EMBL:CEP95350.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
amino acid/peptide transporter
L3_083_000G1_scaffold_485_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2801..3061)
DNA (261bp) protein (87aa)
ATP synthase epsilon chain n=1 Tax=Clostridium difficile CD160 RepID=T3D5E3_CLODI
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
ATP synthase subunit epsilon
L3_083_000G1_scaffold_485_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3064..4461)
DNA (1398bp) protein (466aa)
atpD1; ATP synthase subunit beta (ATPase subunit beta)(ATP synthase F1 sector subunit beta) (EC:3.6.3.14)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=1215059 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T5.;"
ATP synthase subunit beta n=6 Tax=Clostridium difficile RepID=D5PZH1_CLODI
L3_083_000G1_scaffold_485_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4474..5340)
DNA (867bp) protein (289aa)
ATP synthase gamma chain n=178 Tax=Clostridium difficile RepID=T3G509_CLODC
F0F1 ATP synthase subunit gamma
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L3_083_000G1_scaffold_485_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5368..6870)
DNA (1503bp) protein (501aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
ATP synthase subunit alpha n=1 Tax=Clostridium difficile CD160 RepID=T3D7C1_CLODI
atpA; ATP synthase subunit alpha
L3_083_000G1_scaffold_485_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6887..7429)
DNA (543bp) protein (181aa)
ATP synthase subunit delta n=214 Tax=Clostridium difficile RepID=ATPD_CLOD6
atpH; ATP synthase subunit delta
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
L3_083_000G1_scaffold_485_9
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7423..7926)
DNA (504bp) protein (168aa)
ATP synthase subunit b n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VH40_CLOBI
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
atpF; ATP synthase subunit B
L3_083_000G1_scaffold_485_10
[Clostridium] hiranonis, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8028..8279)
DNA (252bp) protein (84aa)
atpE; F0F1 ATP synthase subunit C (EC:3.6.3.15)
ATP synthase F0, C subunit n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G0L9_9FIRM
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242778}; TaxID=500633 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] hiranonis DSM 13275.;"
L3_083_000G1_scaffold_485_11
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8329..9039)
DNA (711bp) protein (237aa)
ATP synthase subunit a n=2 Tax=Clostridium sordellii RepID=T0DV00_CLOSO
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
atpB; ATP synthase subunit A
L3_083_000G1_scaffold_485_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8991..9440)
DNA (450bp) protein (150aa)
atpI2; ATP synthase protein I (ATP synthase F0 sectorsubunit I) (EC:3.6.3.14)
ATP synthase I chain family protein n=1 Tax=Clostridium difficile CD160 RepID=T3D7A0_CLODI
ATP synthase I chain family protein {ECO:0000313|EMBL:EQF22712.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
L3_083_000G1_scaffold_485_13
[Clostridium] hiranonis, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9849..10289)
DNA (441bp) protein (147aa)
Cytidine and deoxycytidylate deaminase zinc-binding region n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G0L5_9FIRM
Cytidine and deoxycytidylate deaminase zinc-binding region {ECO:0000313|EMBL:EEA84711.1}; TaxID=500633 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] hiranonis DSM 13275.;"
cytidine and deoxycytidylate deaminase
L3_083_000G1_scaffold_485_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10502..11347)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Clostridium difficile CD69 RepID=T2ZYZ1_CLODI
Selenium-dependent molybdenum hydroxylase system protein, YqeB family {ECO:0000313|EMBL:EHJ34070.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
hypothetical protein
L3_083_000G1_scaffold_485_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11811..12440)
DNA (630bp) protein (210aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
Uracil phosphoribosyltransferase n=1 Tax=Clostridium difficile Y307 RepID=T4F6H8_CLODI
upp; uracil phosphoribosyltransferase
L3_083_000G1_scaffold_485_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12456..12908)
DNA (453bp) protein (151aa)
Ribose-5-phosphate isomerase 2 {ECO:0000313|EMBL:CAJ70383.1}; EC=5.3.1.6 {ECO:0000313|EMBL:CAJ70383.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
Ribose 5-phosphate isomerase B n=180 Tax=Clostridium difficile RepID=C9XS83_CLODC
ribose-5-phosphate isomerase B
L3_083_000G1_scaffold_485_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12927..13376)
DNA (450bp) protein (150aa)
Protein-tyrosine phosphatase reductase n=2 Tax=Clostridium difficile RepID=U3WES9_CLODI
low molecular weight protein-tyrosine-phosphatase
Low molecular weight phosphotyrosine protein phosphatase {ECO:0000313|EMBL:EFH08930.1}; TaxID=525259 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile NAP08.;"
L3_083_000G1_scaffold_485_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13391..14440)
DNA (1050bp) protein (350aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synthase {ECO:0000256|PIRNR:PIRNR004930}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family n=1 Tax=Clostridium difficile CD160 RepID=T3D5H5_CLODI
hypothetical protein
L3_083_000G1_scaffold_485_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14471..15151)
DNA (681bp) protein (227aa)
ZIP Zinc transporter family protein n=1 Tax=Clostridium difficile CD160 RepID=T3D8J3_CLODI
ZIP Zinc transporter family protein {ECO:0000313|EMBL:EQF22751.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
zinc transporter
L3_083_000G1_scaffold_485_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15277..16341)
DNA (1065bp) protein (355aa)
Peptide chain release factor 1 n=1 Tax=Clostridium difficile CD160 RepID=T3D791_CLODI
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
prfA; peptide chain release factor 1
L3_083_000G1_scaffold_485_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16381..17259)
DNA (879bp) protein (293aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
hemK; Modification methylase HemK (EC:2.1.1.-)
Release factor glutamine methyltransferase n=1 Tax=Clostridium difficile CD160 RepID=T3D8F9_CLODI
L3_083_000G1_scaffold_485_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17241..18176)
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Clostridium difficile CD160 RepID=T3D7D7_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQF22752.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
hypothetical protein
L3_083_000G1_scaffold_485_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(18293..18493)
DNA (201bp) protein (67aa)
50S ribosomal protein L31 n=219 Tax=Clostridium difficile RepID=RL31_CLOD6
rpmE; 50S ribosomal protein L31
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L3_083_000G1_scaffold_485_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18735..20387)
DNA (1653bp) protein (551aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
Transcription termination factor Rho n=1 Tax=Clostridium difficile CD160 RepID=T3D796_CLODI
rho; transcription termination factor Rho
L3_083_000G1_scaffold_485_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20768..21694)
DNA (927bp) protein (309aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=1215059 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T5.;"
UTP--glucose-1-phosphate uridylyltransferase n=6 Tax=Clostridium difficile RepID=D5PZJ3_CLODI
gtaB; utp--glucose-1-phosphate uridylyltransferase (general stress protein 33)
L3_083_000G1_scaffold_485_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21858..23771)
DNA (1914bp) protein (638aa)
Oligoendopeptidase F n=2 Tax=Clostridium difficile RepID=T2XL03_CLODI
Putative oligoendopeptidase F, peptidase M3B family {ECO:0000313|EMBL:CCL23963.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
oligopeptidase
L3_083_000G1_scaffold_485_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24140..26512)
DNA (2373bp) protein (791aa)
Stage II sporulation protein E {ECO:0000313|EMBL:EQF22750.1}; EC=3.1.3.16 {ECO:0000313|EMBL:EQF22750.1};; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
Stage II sporulation protein E n=1 Tax=Clostridium difficile CD160 RepID=T3D852_CLODI
spoIIE; stage II sporulation protein e
L3_083_000G1_scaffold_485_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26605..27525)
DNA (921bp) protein (307aa)
Ppx/GppA phosphatase family protein n=1 Tax=Clostridium difficile CD160 RepID=T3D818_CLODI
Ppx/GppA phosphatase family protein {ECO:0000313|EMBL:EQF22715.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
exopolyphosphatase
L3_083_000G1_scaffold_485_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27644..27928)
DNA (285bp) protein (95aa)
Septum formation initiator family protein n=7 Tax=Clostridium difficile RepID=T3EYL0_CLODI
Putative cell division protein FtsL {ECO:0000313|EMBL:EHJ27141.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
septum formation protein
L3_083_000G1_scaffold_485_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27978..28589)
DNA (612bp) protein (204aa)
Spore cortex YabQ family protein n=1 Tax=Clostridium difficile CD160 RepID=T3D5G1_CLODI
Spore cortex YabQ family protein {ECO:0000313|EMBL:EQF22723.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
hypothetical protein
Displaying items 1-30 of 55 in total

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