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L3_083_000G1_scaffold_538

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_000G1_scaffold_538_1
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..271
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PR04_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23199.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Predicted phosphohydrolases
L3_083_000G1_scaffold_538_2
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

268..1233
DNA (966bp) protein (322aa)
Cyclic pyranopterin phosphate synthase {ECO:0000256|SAAS:SAAS00064088}; EC=4.1.99.18 {ECO:0000256|SAAS:SAAS00064088};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PFT3_9CLOT
moaA; molybdenum cofactor biosynthesis protein A
L3_083_000G1_scaffold_538_3
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1251..2048
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QMK2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23197.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
molybdenum ABC transporter, periplasmic molybdate-binding protein
L3_083_000G1_scaffold_538_4
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2052..2723
DNA (672bp) protein (224aa)
Molybdate ABC transporter, permease protein n=2 Tax=Clostridium RepID=B6FS28_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23196.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
molybdate ABC transporter permease
L3_083_000G1_scaffold_538_5
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2725..3759
DNA (1035bp) protein (345aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridium RepID=B6FS27_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEA81097.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
sulfate/molybdate ABC transporter ATPase
L3_083_000G1_scaffold_538_6
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3848..4633
DNA (786bp) protein (262aa)
Segregation and condensation protein A n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FS26_9CLOT
Segregation and condensation protein A {ECO:0000256|HAMAP-Rule:MF_01805, ECO:0000256|SAAS:SAAS00093938}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
scpA; chromosome segregation and condensation protein ScpA
L3_083_000G1_scaffold_538_7
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4623..5192
DNA (570bp) protein (190aa)
Segregation and condensation protein B n=2 Tax=Clostridium RepID=B6FS25_9CLOT
Segregation and condensation protein B {ECO:0000256|HAMAP-Rule:MF_01804, ECO:0000256|SAAS:SAAS00086417}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
segregation and condensation protein B
L3_083_000G1_scaffold_538_8
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5254..6444
DNA (1191bp) protein (397aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QMJ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23192.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L3_083_000G1_scaffold_538_9
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6548..8539
DNA (1992bp) protein (664aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Isopropylmalate/homocitrate/citramalate synthases (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=Clostridium nexile CAG:348 RepID=R6PXK2_9CLOT
L3_083_000G1_scaffold_538_10
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8602..9975)
DNA (1374bp) protein (458aa)
Amino acid/peptide transporter n=2 Tax=Clostridium RepID=B6FS22_9CLOT
Amino acid/peptide transporter {ECO:0000313|EMBL:EEA81092.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
proton-dependent oligopeptide transporter
L3_083_000G1_scaffold_538_11
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10003..11790)
DNA (1788bp) protein (596aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PQZ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23189.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
peptidase M24
L3_083_000G1_scaffold_538_12
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12018..13454
DNA (1437bp) protein (479aa)
Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) (EC:6.4.1.3)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PFS4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23188.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L3_083_000G1_scaffold_538_13
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13469..14233
DNA (765bp) protein (255aa)
Oxaloacetate decarboxylase gamma chain {ECO:0000256|RuleBase:RU004278}; EC=4.1.1.3 {ECO:0000256|RuleBase:RU004278};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Oxaloacetate decarboxylase gamma chain n=2 Tax=Clostridium RepID=R6QMJ3_9CLOT
sodium pump decarboxylases, gamma subunit
L3_083_000G1_scaffold_538_14
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14261..14629
DNA (369bp) protein (123aa)
Biotin-requiring enzyme n=2 Tax=Clostridium RepID=B6FS17_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23186.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Biotin carboxyl carrier protein
L3_083_000G1_scaffold_538_15
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14641..15792
DNA (1152bp) protein (384aa)
sodium ion-translocating decarboxylase, beta subunit (EC:4.1.1.3 4.1.1.70)
Sodium ion-translocating decarboxylase, beta subunit n=2 Tax=Clostridium RepID=B6FS16_9CLOT
Sodium ion-translocating decarboxylase, beta subunit {ECO:0000313|EMBL:EEA81182.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L3_083_000G1_scaffold_538_16
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15810..17219
DNA (1410bp) protein (470aa)
Pyruvate/oxaloacetate carboxyltransferase (EC:4.1.1.3)
Conserved carboxylase domain protein n=2 Tax=Clostridium RepID=B6FS15_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23184.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L3_083_000G1_scaffold_538_17
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17277..17468)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FS14_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOS24310.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
hypothetical protein
L3_083_000G1_scaffold_538_18
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17692..18261
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QMI8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23182.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
alkyl hydroperoxide reductase
L3_083_000G1_scaffold_538_19
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18273..18941
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PXJ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23181.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_083_000G1_scaffold_538_20
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19138..19674
DNA (537bp) protein (179aa)
Transcriptional regulator, TetR family n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FS10_9CLOT
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EEA81176.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Transcriptional regulator
L3_083_000G1_scaffold_538_21
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19807..21303
DNA (1497bp) protein (499aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
glycerol kinase (EC:2.7.1.30)
Glycerol kinase n=1 Tax=Clostridium nexile CAG:348 RepID=R6PQY3_9CLOT
L3_083_000G1_scaffold_538_22
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21335..22045
DNA (711bp) protein (237aa)
MIP family channel protein n=2 Tax=Clostridium RepID=B6FS08_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23178.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
MIP family channel proteins
L3_083_000G1_scaffold_538_23
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22176..23612
DNA (1437bp) protein (479aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QMI3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23177.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Predicted dehydrogenase
L3_083_000G1_scaffold_538_24
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23630..24892
DNA (1263bp) protein (421aa)
Thioredoxin reductase (EC:1.5.3.1)
Pyridine nucleotide-disulfide oxidoreductase n=2 Tax=Clostridium RepID=B6FS06_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23176.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L3_083_000G1_scaffold_538_25
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24901..25266
DNA (366bp) protein (122aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FS05_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23175.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Uncharacterized protein with conserved CXXC pairs
L3_083_000G1_scaffold_538_26
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25379..26305
DNA (927bp) protein (309aa)
SIS domain protein n=2 Tax=Clostridium RepID=B6FS03_9CLOT
SIS domain protein {ECO:0000313|EMBL:EEA81215.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Transcriptional regulators
L3_083_000G1_scaffold_538_27
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26306..27532
DNA (1227bp) protein (409aa)
Flavoprotein family protein n=2 Tax=Clostridium RepID=B6FS02_9CLOT
Flavoprotein family protein {ECO:0000313|EMBL:EEA81214.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
conserved hypothetical protein TIGR00275
L3_083_000G1_scaffold_538_28
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27549..28205
DNA (657bp) protein (219aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase n=2 Tax=Clostridium RepID=B6FS01_9CLOT
L3_083_000G1_scaffold_538_29
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28214..28702
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PXI5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23171.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_083_000G1_scaffold_538_30
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28692..29546
DNA (855bp) protein (285aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
(E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=2 Tax=Clostridium RepID=B6FRZ8_9CLOT
Displaying items 1-30 of 58 in total

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