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L3_083_000G1_scaffold_562

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Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_000G1_scaffold_562_1
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..87
DNA (87bp) protein (29aa)
UPF0297 protein HMPREF0216_01861 n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QFE5_9CLOT
UPF0297 protein HMPREF0216_01861 {ECO:0000256|HAMAP-Rule:MF_01507}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_083_000G1_scaffold_562_2
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

227..649
DNA (423bp) protein (141aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
putative holliday junction resolvase (EC:3.1.-.-)
Putative Holliday junction resolvase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QG68_9CLOT
L3_083_000G1_scaffold_562_3
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

874..1149
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QF99_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY26674.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_083_000G1_scaffold_562_4
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1172..1642
DNA (471bp) protein (157aa)
Transcriptional regulator, Fur family n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QFA9_9CLOT
Transcriptional regulator, Fur family {ECO:0000313|EMBL:EKY26673.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
FUR family transcriptional regulator
L3_083_000G1_scaffold_562_5
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1698..3365
DNA (1668bp) protein (556aa)
Ribonuclease J 1 n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QGF6_9CLOT
Ribonuclease J 1 {ECO:0000313|EMBL:EKY26672.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
RNA-metabolising metallo-beta-lactamase family protein
L3_083_000G1_scaffold_562_6
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3703..5529
DNA (1827bp) protein (609aa)
GTP-binding protein TypA n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QFE1_9CLOT
GTP-binding protein TypA {ECO:0000313|EMBL:EKY26671.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
typA; GTP-binding protein TypA/BipA
L3_083_000G1_scaffold_562_7
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5622..6671
DNA (1050bp) protein (350aa)
YceG family protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QG62_9CLOT
YceG family protein {ECO:0000313|EMBL:EKY26670.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
aminodeoxychorismate lyase
L3_083_000G1_scaffold_562_8
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6690..7334
DNA (645bp) protein (215aa)
O-methyltransferase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QF93_9CLOT
O-methyltransferase {ECO:0000313|EMBL:EKY26669.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
spermine/spermidine synthase family protein
L3_083_000G1_scaffold_562_9
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7339..8583
DNA (1245bp) protein (415aa)
Peptidase, U32 family n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QFA4_9CLOT
Peptidase, U32 family {ECO:0000313|EMBL:EKY26668.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
peptidase U32
L3_083_000G1_scaffold_562_10
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8599..9216
DNA (618bp) protein (206aa)
Uridine kinase {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825}; EC=2.7.1.48 {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825};; Cytidine monophosphokinase {ECO:0000256|HAMAP-Rule:MF_00551}; Uridine monophosphokinase {ECO:0000256|HAMAP-Rule:MF_00551}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
udk; uridine kinase (EC:2.7.1.48)
Uridine kinase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QGF1_9CLOT
L3_083_000G1_scaffold_562_11
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9270..10889
DNA (1620bp) protein (540aa)
Penicillin-binding protein, transpeptidase domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QFD5_9CLOT
Penicillin-binding protein, transpeptidase domain protein {ECO:0000313|EMBL:EKY26666.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
cell division protein FtsI/penicillin-binding protein 2
L3_083_000G1_scaffold_562_12
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10979..11686
DNA (708bp) protein (236aa)
RNA polymerase sigma factor n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QG56_9CLOT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
sigK; RNA polymerase sigma-28 factor SigK
L3_083_000G1_scaffold_562_13
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11790..12845
DNA (1056bp) protein (352aa)
Twitching mobility protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QF89_9CLOT
Twitching mobility protein {ECO:0000313|EMBL:EKY26664.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
twitching motility family protein
L3_083_000G1_scaffold_562_14
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13397..14518
DNA (1122bp) protein (374aa)
Cell division protein FtsZ n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QF98_9CLOT
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
ftsZ; cell division protein FtsZ
L3_083_000G1_scaffold_562_15
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14774..15574
DNA (801bp) protein (267aa)
Sporulation sigma-E factor-processing peptidase {ECO:0000256|PIRNR:PIRNR018571}; EC=3.4.23.- {ECO:0000256|PIRNR:PIRNR018571};; Membrane-associated aspartic protease {ECO:0000256|PIRNR:PIRNR018571}; Stage II sporulation protein GA {ECO:0000256|PIRNR:PIRNR018571}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
Sigma-E processing peptidase SpoIIGA n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QGE7_9CLOT
sporulation factor SpoIIGA family protein
L3_083_000G1_scaffold_562_16
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15584..16291
DNA (708bp) protein (236aa)
RNA polymerase sigma factor n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QFD1_9CLOT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
sporulation sigma factor SigE
L3_083_000G1_scaffold_562_17
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16374..17147
DNA (774bp) protein (258aa)
RNA polymerase sigma factor n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QG50_9CLOT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
sigG; sporulation sigma factor SigG
L3_083_000G1_scaffold_562_18
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17339..17620
DNA (282bp) protein (94aa)
Sporulation protein, YlmC/YmxH family n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QF84_9CLOT
Sporulation protein, YlmC/YmxH family {ECO:0000313|EMBL:EKY26659.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
sporulation protein, YlmC/YmxH family
L3_083_000G1_scaffold_562_19
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17672..18139
DNA (468bp) protein (156aa)
Transcriptional repressor NrdR n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QF94_9CLOT
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
nrdR; transcriptional regulator NrdR
L3_083_000G1_scaffold_562_20
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18373..19113
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QGE2_9CLOT
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_083_000G1_scaffold_562_21
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19133..19831
DNA (699bp) protein (233aa)
Alkaline phosphatase synthesis transcriptional regulatory protein PhoP n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QFC7_9CLOT
Alkaline phosphatase synthesis transcriptional regulatory protein PhoP {ECO:0000313|EMBL:EKY26656.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
two component transcriptional regulator
L3_083_000G1_scaffold_562_22
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19835..21514
DNA (1680bp) protein (560aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
PAS domain S-box protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QG44_9CLOT
multi-sensor signal transduction histidine kinase
L3_083_000G1_scaffold_562_23
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21759..22607
DNA (849bp) protein (283aa)
Phosphate binding protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QF80_9CLOT
Phosphate binding protein {ECO:0000313|EMBL:EKY26654.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
phosphate ABC transporter substrate-binding protein
L3_083_000G1_scaffold_562_24
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22698..23591
DNA (894bp) protein (298aa)
Phosphate ABC transporter, permease protein PstC n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QF88_9CLOT
Phosphate ABC transporter, permease protein PstC {ECO:0000313|EMBL:EKY26653.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
phosphate ABC transporter permease
L3_083_000G1_scaffold_562_25
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23594..24418
DNA (825bp) protein (275aa)
Phosphate ABC transporter permease protein PstA n=1 Tax=Clostridium sp. CAG:221 RepID=R6G4S9_9CLOT
Phosphate ABC transporter permease protein PstA {ECO:0000313|EMBL:CDB16494.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
phosphateABC transporter permease
L3_083_000G1_scaffold_562_26
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24515..25279
DNA (765bp) protein (255aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
pstB1; phosphate import ATP-binding protein PstB (EC:3.6.3.27)
Phosphate ABC transporter, ATP-binding protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QG36_9CLOT
L3_083_000G1_scaffold_562_27
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25376..26032
DNA (657bp) protein (219aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QF74_9CLOT
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
phoU; phosphate transport system regulatory protein PhoU
L3_083_000G1_scaffold_562_28
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26142..27479
DNA (1338bp) protein (446aa)
Putative FeS-containing Cyanobacterial-specific oxidoreductase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QF83_9CLOT
Putative FeS-containing Cyanobacterial-specific oxidoreductase {ECO:0000313|EMBL:EKY26648.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
Fe-S oxidoreductase
L3_083_000G1_scaffold_562_29
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27479..28798
DNA (1320bp) protein (440aa)
GTPase Der n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QGD2_9CLOT
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
engA; GTP-binding protein EngA
L3_083_000G1_scaffold_562_30
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28801..29793
DNA (993bp) protein (331aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QFB7_9CLOT
Displaying items 1-30 of 51 in total

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