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L3_083_000G1_scaffold_576

Search features with annotation key words

Displaying items 1-30 of 93 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_000G1_scaffold_576_1
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..132
DNA (132bp) protein (44aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJC9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27390.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_083_000G1_scaffold_576_2
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

268..1734
DNA (1467bp) protein (489aa)
Pyridoxal-phosphate dependent protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQY2_9FIRM
Pyridoxal-phosphate dependent protein {ECO:0000313|EMBL:EHM50600.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
putative cysteine synthase
L3_083_000G1_scaffold_576_3
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1811..3085
DNA (1275bp) protein (425aa)
Threonine synthase {ECO:0000256|PIRNR:PIRNR038945}; EC=4.2.3.1 {ECO:0000256|PIRNR:PIRNR038945};; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
thrC; threonine synthase (EC:4.2.3.1)
Threonine synthase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQY3_9FIRM
L3_083_000G1_scaffold_576_4
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3114..3470
DNA (357bp) protein (119aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YQY4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI72284.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_083_000G1_scaffold_576_5
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3490..4029
DNA (540bp) protein (180aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJD3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57579.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
putative purine catabolism protein
L3_083_000G1_scaffold_576_6
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4094..5491)
DNA (1398bp) protein (466aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CYD9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI72286.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_083_000G1_scaffold_576_7
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5484..5657)
DNA (174bp) protein (58aa)
Sigma-70, region 4 n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CSS6_9CLOT
Sigma-70, region 4 {ECO:0000313|EMBL:ERI72287.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
elf family DNA-directed RNA polymerase sigma subunit sigv
L3_083_000G1_scaffold_576_8
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5605..5979)
DNA (375bp) protein (125aa)
Sigma-70, region 4 n=2 Tax=Clostridiales RepID=G9YQY7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57581.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
RNA polymerase sigma factor
L3_083_000G1_scaffold_576_9
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6108..7358)
DNA (1251bp) protein (417aa)
Uncharacterized protein (Fragment) n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQY8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM50606.1}; Flags: Fragment;; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L3_083_000G1_scaffold_576_10
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7339..7830)
DNA (492bp) protein (164aa)
Sigma-70 region 2 n=3 Tax=Clostridiales RepID=G9YQH1_9FIRM
Sigma-70 region 2 {ECO:0000313|EMBL:EHM51388.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
ECF subfamily RNA polymerase sigma-24 subunit
L3_083_000G1_scaffold_576_11
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8071..8346)
DNA (276bp) protein (92aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YQG9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27292.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
glutaredoxin-like protein
L3_083_000G1_scaffold_576_12
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8343..9098)
DNA (756bp) protein (252aa)
Putative xanthine dehydrogenase accessory factor n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQG8_9FIRM
Putative xanthine dehydrogenase accessory factor {ECO:0000313|EMBL:EHM51385.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
putative xanthine dehydrogenase accessory factor
L3_083_000G1_scaffold_576_13
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9086..9889)
DNA (804bp) protein (268aa)
YqeB family selenium-dependent molybdenum hydroxylase system protein n=2 Tax=Clostridiales RepID=H1CJE0_9FIRM
YqeB family selenium-dependent molybdenum hydroxylase system protein {ECO:0000313|EMBL:KGF57499.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
selenium-dependent molybdenum hydroxylase system protein, YqeB family
L3_083_000G1_scaffold_576_14
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9877..10599)
DNA (723bp) protein (241aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJE1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27295.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
probable selenium-dependent hydroxylase accessory protein YqeC
L3_083_000G1_scaffold_576_15
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10602..11165)
DNA (564bp) protein (188aa)
Putative manganese efflux pump MntP n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJE2_9FIRM
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_083_000G1_scaffold_576_16
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11278..11721
DNA (444bp) protein (148aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative deaminase (EC:3.5.4.-)
Cytidine and deoxycytidylate deaminase zinc-binding region n=2 Tax=Clostridiales RepID=U2C3Z1_9CLOT
L3_083_000G1_scaffold_576_17
unknown

Not on your lists

comp(12117..12314)
DNA (198bp) protein (66aa)

This feature has no annotations

L3_083_000G1_scaffold_576_18
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12322..13305)
DNA (984bp) protein (328aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YTQ2_9FIRM
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EHM43718.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
nucleoside ABC transporter membrane protein
L3_083_000G1_scaffold_576_19
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13302..14408)
DNA (1107bp) protein (369aa)
Branched-chain amino acid ABC transporter, permease protein n=2 Tax=Clostridiales RepID=G9YTQ3_9FIRM
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:ERI67865.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
ABC transporter membrane component
L3_083_000G1_scaffold_576_20
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14401..15984)
DNA (1584bp) protein (528aa)
ABC transporter, ATP-binding protein (Fragment) n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YTQ4_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EHM43720.1}; Flags: Fragment;; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
ABC transporter ATP-binding protein
L3_083_000G1_scaffold_576_21
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16143..17387)
DNA (1245bp) protein (415aa)
Basic membrane protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YTQ5_9FIRM
Basic membrane protein {ECO:0000313|EMBL:EHM43681.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
nucleoside-binding protein
L3_083_000G1_scaffold_576_22
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17725..18297)
DNA (573bp) protein (191aa)
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502}; Short=XPRTase {ECO:0000256|HAMAP-Rule:MF_01184};; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502};; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
xanthine phosphoribosyltransferase (EC:2.4.2.22)
Xanthine phosphoribosyltransferase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YTQ6_9FIRM
L3_083_000G1_scaffold_576_23
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18519..20180
DNA (1662bp) protein (554aa)
putative glycoside hydrolase (EC:3.2.1.-)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YTQ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57508.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_083_000G1_scaffold_576_24
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20213..21067
DNA (855bp) protein (285aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YTQ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27304.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_083_000G1_scaffold_576_25
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21371..22174
DNA (804bp) protein (268aa)
Putative nucleoid occlusion protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BFV9_9CLOT
Putative nucleoid occlusion protein {ECO:0000313|EMBL:ERI77019.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
ParB family chromosome partition protein
L3_083_000G1_scaffold_576_26
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22360..23145
DNA (786bp) protein (262aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJF2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57511.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
parA; chromosome partitioning protein ParA
L3_083_000G1_scaffold_576_27
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23149..24045
DNA (897bp) protein (299aa)
Putative stage 0 sporulation protein J n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2DBW2_9CLOT
Putative stage 0 sporulation protein J {ECO:0000313|EMBL:ERI77016.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
parB; chromosome partitioning protein ParB
L3_083_000G1_scaffold_576_28
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24042..24605
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BXQ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF57513.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_083_000G1_scaffold_576_29
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25056..26357
DNA (1302bp) protein (434aa)
Serine-tRNA ligase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJF5_9FIRM
Serine-tRNA ligase {ECO:0000313|EMBL:EHO27309.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
serS; seryl-tRNA synthetase
L3_083_000G1_scaffold_576_30
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26394..26612
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YR53_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM50280.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
Displaying items 1-30 of 93 in total

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