ggKbase home page

L3_083_000G1_scaffold_3402

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_000G1_scaffold_3402_1
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..382
DNA (381bp) protein (127aa)
Relaxase/mobilization nuclease domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FL76_9CLOT
Relaxase/mobilization nuclease domain protein {ECO:0000313|EMBL:EEA83205.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_083_000G1_scaffold_3402_2
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

386..1201
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PEL6_9CLOT
Relaxase/mobilization nuclease domain protein {ECO:0000313|EMBL:EEA83205.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Relaxase/Mobilisation nuclease domain.
L3_083_000G1_scaffold_3402_3
Bacillus azotoformans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1367..1552
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C7Y0_9FIRM
Transcriptional regulator, AlpA family {ECO:0000313|EMBL:KEF36078.1}; TaxID=1348973 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus azotoformans MEV2011.;"
DNA binding domain, excisionase family
L3_083_000G1_scaffold_3402_4
Veillonella sp. DORA_B_18_19_23, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

1573..2307
DNA (735bp) protein (245aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=1403933 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_B_18_19_23.;"
UPI0003D611A5 related cluster n=1 Tax=unknown RepID=UPI0003D611A5
DNA (cytosine-5-)-methyltransferase
L3_083_000G1_scaffold_3402_5
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2297..3358
DNA (1062bp) protein (354aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
dcm_2; DNA (cytosine-5-)-methyltransferase (EC:2.1.1.37)
Cytosine-specific methyltransferase n=1 Tax=Bacillus cereus H3081.97 RepID=B5V3P9_BACCE
L3_083_000G1_scaffold_3402_6
Bacillus sp. CMAA 1185, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3372..5594
DNA (2223bp) protein (741aa)
UPI0003D5B97F related cluster n=1 Tax=unknown RepID=UPI0003D5B97F
Uncharacterized protein {ECO:0000313|EMBL:KKB93500.1}; TaxID=1385719 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. CMAA 1185.;"
hypothetical protein
L3_083_000G1_scaffold_3402_7
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5612..7594
DNA (1983bp) protein (661aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IJM4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI58244.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
LlaJI restriction endonuclease.
L3_083_000G1_scaffold_3402_8
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

Not on your lists

7627..8202
DNA (576bp) protein (192aa)
Uncharacterized protein id=1935056 bin=GWD2_Clostridiales_32_59 species=Desulfitobacterium dehalogenans genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Clostridiales_32_59 organism_group=Firmicute organism_desc=a65
Uncharacterized protein {ECO:0000313|EMBL:CDD66363.1}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
hypothetical protein
L3_083_000G1_scaffold_3402_9
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

Not on your lists

8440..9201
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BKL4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD66361.1}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
hypothetical protein
L3_083_000G1_scaffold_3402_10
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9438..10622
DNA (1185bp) protein (395aa)
Integrase core domain n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KNC2_9FIRM
Integrase core domain.
Integrase core domain {ECO:0000313|EMBL:CBL08374.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_083_000G1_scaffold_3402_11
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10644..11231
DNA (588bp) protein (196aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4Z868_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR75085.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_083_000G1_scaffold_3402_12
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11174..12886
DNA (1713bp) protein (571aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4Z869_EUBR3
Uncharacterized protein {ECO:0000313|EMBL:ACR75086.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
hypothetical protein
Displaying 12 items

View Taxonomy