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L3_083_000G1_scaffold_1062

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_000G1_scaffold_1062_1
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..807)
DNA (807bp) protein (269aa)
conserved hypothetical protein (EC:1.4.99.1)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5RP12_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ42398.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
L3_083_000G1_scaffold_1062_2
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1062..3164)
DNA (2103bp) protein (701aa)
Putative membrane protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5SBE8_9CLOT
Putative membrane protein {ECO:0000313|EMBL:CCZ42397.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
hypothetical protein
L3_083_000G1_scaffold_1062_3
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3168..4649)
DNA (1482bp) protein (494aa)
Putative membrane protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5S5Z9_9CLOT
Putative membrane protein {ECO:0000313|EMBL:CCZ42396.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
hypothetical protein
L3_083_000G1_scaffold_1062_4
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4663..5172)
DNA (510bp) protein (170aa)
Acetolactate synthase small subunit n=1 Tax=Clostridium sp. CAG:122 RepID=R5RMB1_9CLOT
Acetolactate synthase small subunit {ECO:0000313|EMBL:CCZ42395.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
acetolactate synthase small subunit
L3_083_000G1_scaffold_1062_5
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5202..6923)
DNA (1722bp) protein (574aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
Acetolactate synthase n=1 Tax=Clostridium sp. CAG:122 RepID=R5RUU8_9CLOT
acetolactate synthase large subunit
L3_083_000G1_scaffold_1062_6
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7052..9256)
DNA (2205bp) protein (735aa)
Beta-lactamase n=1 Tax=Clostridium sp. CAG:122 RepID=R5RP06_9CLOT
Beta-lactamase {ECO:0000313|EMBL:CCZ42393.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
beta-lactamase
L3_083_000G1_scaffold_1062_7
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9545..9817)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5SBE2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ42392.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
HPrNtr domain-containing protein
L3_083_000G1_scaffold_1062_8
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9918..11048)
DNA (1131bp) protein (377aa)
Two-component system response regulator n=1 Tax=Clostridium sp. CAG:122 RepID=R5S5Z4_9CLOT
Two-component system response regulator {ECO:0000313|EMBL:CCZ42391.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
AraC-type DNA-binding protein, response regulator
L3_083_000G1_scaffold_1062_9
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11242..12234)
DNA (993bp) protein (331aa)
Phosphate acetyltransferase n=1 Tax=Clostridium sp. CAG:122 RepID=R5RMA7_9CLOT
Phosphate acetyltransferase {ECO:0000313|EMBL:CCZ42390.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
phosphate acetyltransferase
L3_083_000G1_scaffold_1062_10
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12443..13525
DNA (1083bp) protein (361aa)
GAF domain-containing protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5RUU1_9CLOT
GAF domain-containing protein {ECO:0000313|EMBL:CCZ42389.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
GAF domain-containing protein
L3_083_000G1_scaffold_1062_11
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13711..15705
DNA (1995bp) protein (665aa)
Beta-galactosidase {ECO:0000256|PIRNR:PIRNR001084}; Short=Beta-gal {ECO:0000256|PIRNR:PIRNR001084};; EC=3.2.1.23 {ECO:0000256|PIRNR:PIRNR001084};; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
Beta-galactosidase (EC:3.2.1.23)
Beta-galactosidase n=1 Tax=Clostridium sp. CAG:122 RepID=R5RP00_9CLOT
L3_083_000G1_scaffold_1062_12
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15838..16023)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5SBD4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ42387.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
L3_083_000G1_scaffold_1062_13
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16477..18831
DNA (2355bp) protein (785aa)
Ferrous iron transport protein B n=1 Tax=Clostridium sp. CAG:122 RepID=R5S5Y9_9CLOT
Ferrous iron transport protein B {ECO:0000313|EMBL:CCZ42386.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
ferrous iron transporter FeoB
L3_083_000G1_scaffold_1062_14
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19193..19999)
DNA (807bp) protein (269aa)
Type-2 restriction enzyme EcoRV n=1 Tax=Clostridium sp. CAG:122 RepID=R5RMA3_9CLOT
Type-2 restriction enzyme EcoRV {ECO:0000313|EMBL:CCZ42385.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
restriction endonuclease EcoRV
L3_083_000G1_scaffold_1062_15
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20021..20938)
DNA (918bp) protein (306aa)
Site-specific DNA-methyltransferase (adenine-specific) {ECO:0000256|RuleBase:RU361257}; EC=2.1.1.72 {ECO:0000256|RuleBase:RU361257};; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
DNA adenine methylase n=1 Tax=Clostridium sp. CAG:122 RepID=R5RUT5_9CLOT
Modification methylase EcoRV
L3_083_000G1_scaffold_1062_16
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20951..21349)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5RNZ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ42383.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
orfX
L3_083_000G1_scaffold_1062_17
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21429..21626)
DNA (198bp) protein (66aa)
Predicted transcriptional regulator n=1 Tax=Clostridium sp. CAG:122 RepID=R5SBC9_9CLOT
Predicted transcriptional regulator {ECO:0000313|EMBL:CCZ42382.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
Predicted transcriptional regulator
L3_083_000G1_scaffold_1062_18
Clostridium sp. CAG:253, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(21822..22214)
DNA (393bp) protein (131aa)
30S ribosomal protein S9 n=2 Tax=environmental samples RepID=R5S5Y3_9CLOT
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=1262785 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:253.;"
SSU ribosomal protein S9P
L3_083_000G1_scaffold_1062_19
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(22234..22674)
DNA (441bp) protein (147aa)
50S ribosomal protein L13 n=2 Tax=environmental samples RepID=R5RM99_9CLOT
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
LSU ribosomal protein L13P
L3_083_000G1_scaffold_1062_20
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23143..25443
DNA (2301bp) protein (767aa)
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
Beta-glucosidase-related glycosidases n=1 Tax=Clostridium sp. CAG:122 RepID=R5RUT0_9CLOT
Beta-glucosidase-related glycosidases {ECO:0000313|EMBL:CCZ42379.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
L3_083_000G1_scaffold_1062_21
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25595..26485)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5RNZ1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ42378.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
Uncharacterized conserved protein related to MYG1 family
L3_083_000G1_scaffold_1062_22
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26690..27901)
DNA (1212bp) protein (404aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
isocitrate dehydrogenase, NADP-dependent, eukaryotic type (EC:1.1.1.42)
Isocitrate dehydrogenase [NADP] n=1 Tax=Clostridium sp. CAG:122 RepID=R5SBC3_9CLOT
L3_083_000G1_scaffold_1062_23
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27905..28033)
DNA (129bp) protein (43aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5S5X8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ42376.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
L3_083_000G1_scaffold_1062_24
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28259..29398
DNA (1140bp) protein (380aa)
Ig domain protein group 2 domain protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5RM95_9CLOT
Ig domain protein group 2 domain protein {ECO:0000313|EMBL:CCZ42375.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
Bacterial Ig-like domain (group 2).
L3_083_000G1_scaffold_1062_25
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29444..30871)
DNA (1428bp) protein (476aa)
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II (EC:6.2.1.3)
AMP-binding enzyme n=1 Tax=Clostridium sp. CAG:122 RepID=R5RUS7_9CLOT
AMP-binding enzyme {ECO:0000313|EMBL:CCZ42374.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
L3_083_000G1_scaffold_1062_26
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30817..31986)
DNA (1170bp) protein (390aa)
Acetyl-CoA C-acetyltransferase n=1 Tax=Clostridium sp. CAG:122 RepID=R5RNY6_9CLOT
Acetyl-CoA C-acetyltransferase {ECO:0000313|EMBL:CCZ42373.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
thiolase
L3_083_000G1_scaffold_1062_27
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32085..33026)
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5SBB7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ42372.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
L3_083_000G1_scaffold_1062_28
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33327..33887
DNA (561bp) protein (187aa)
BioY family protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5S5X3_9CLOT
BioY family protein {ECO:0000313|EMBL:CCZ42371.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
hypothetical protein
L3_083_000G1_scaffold_1062_29
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34008..34553)
DNA (546bp) protein (182aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Clostridium sp. CAG:122 RepID=R5RM88_9CLOT
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
Displaying 29 items

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