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L3_083_000G1_scaffold_1259

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_000G1_scaffold_1259_1
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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194..928
DNA (735bp) protein (245aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
Parvulin-like peptidyl-prolyl isomerase (EC:5.2.1.8)
Foldase protein PrsA n=1 Tax=Clostridium sp. CAG:122 RepID=R5S4M7_9CLOT
L3_083_000G1_scaffold_1259_2
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1229..1765
DNA (537bp) protein (179aa)
RNA polymerase sigma factor n=1 Tax=Clostridium sp. CAG:122 RepID=R5RL35_9CLOT
RNA polymerase sigma factor {ECO:0000313|EMBL:CCZ41930.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
RNA polymerase subunit sigma-24
L3_083_000G1_scaffold_1259_3
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1859..3073
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5RTI0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ41929.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
L3_083_000G1_scaffold_1259_4
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3118..3612
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5RMQ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ41928.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
G:T/U mismatch-specific DNA glycosylase
L3_083_000G1_scaffold_1259_5
Clostridium sp. CAG:253, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3807..5711
DNA (1905bp) protein (635aa)
Oligopeptide transporter OPT family n=1 Tax=Clostridium sp. CAG:253 RepID=R6MWF4_9CLOT
Oligopeptide transporter OPT family {ECO:0000313|EMBL:CDB90207.1}; TaxID=1262785 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:253.;"
hypothetical protein
L3_083_000G1_scaffold_1259_6
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5730..6089
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5S4M3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ41926.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
hypothetical protein
L3_083_000G1_scaffold_1259_7
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6419..6880
DNA (462bp) protein (154aa)
S-ribosylhomocysteine lyase {ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|SAAS:SAAS00059628};; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
LuxS protein involved in autoinducer AI2 synthesis (EC:4.4.1.21)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5RL28_9CLOT
L3_083_000G1_scaffold_1259_8
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6906..7592
DNA (687bp) protein (229aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase (EC:3.2.2.9)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase n=1 Tax=Clostridium sp. CAG:122 RepID=R5RTH5_9CLOT
L3_083_000G1_scaffold_1259_9
Clostridium sp. CAG:253, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7703..8632
DNA (930bp) protein (310aa)
CobW/P47K family protein n=1 Tax=Clostridium sp. CAG:253 RepID=R6M782_9CLOT
CobW/P47K family protein {ECO:0000313|EMBL:CDB90211.1}; TaxID=1262785 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:253.;"
Putative GTPases (G3E family)
L3_083_000G1_scaffold_1259_10
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8706..9128)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5S9Z9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ41922.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
L3_083_000G1_scaffold_1259_11
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9166..10086)
DNA (921bp) protein (307aa)
serine O-acetyltransferase (EC:2.3.1.30)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5S4M0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ41921.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
L3_083_000G1_scaffold_1259_12
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10448..11893
DNA (1446bp) protein (482aa)
Citrate synthase (si) (EC:2.3.3.1)
Citrate synthase n=1 Tax=Clostridium sp. CAG:122 RepID=R5RL23_9CLOT
Citrate synthase {ECO:0000313|EMBL:CCZ41920.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
L3_083_000G1_scaffold_1259_13
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12424..13119
DNA (696bp) protein (232aa)
Two component transcriptional regulator winged helix family n=1 Tax=Clostridium sp. CAG:122 RepID=R5RTG9_9CLOT
Two component transcriptional regulator winged helix family {ECO:0000313|EMBL:CCZ41919.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
two component transcriptional regulator
L3_083_000G1_scaffold_1259_14
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13109..14326
DNA (1218bp) protein (406aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
Sensor protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5RMP4_9CLOT
Signal transduction histidine kinase
L3_083_000G1_scaffold_1259_15
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14334..16937
DNA (2604bp) protein (868aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5S9Z2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ41917.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
hypothetical protein
L3_083_000G1_scaffold_1259_16
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17078..18040
DNA (963bp) protein (321aa)
ABC-type multidrug transport system ATPase component n=1 Tax=Clostridium sp. CAG:122 RepID=R5S4L5_9CLOT
ABC-type multidrug transport system ATPase component {ECO:0000313|EMBL:CCZ41916.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
hypothetical protein
L3_083_000G1_scaffold_1259_17
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18009..18908
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5RL17_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ41915.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
hypothetical protein
L3_083_000G1_scaffold_1259_18
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19035..20156
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5RTG2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ41914.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
hypothetical protein
L3_083_000G1_scaffold_1259_19
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20352..21146)
DNA (795bp) protein (265aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
Glutamate 5-kinase n=1 Tax=Clostridium sp. CAG:122 RepID=R5RMN6_9CLOT
glutamate 5-kinase
L3_083_000G1_scaffold_1259_20
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21443..24979
DNA (3537bp) protein (1179aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5S9Y5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ41912.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
hypothetical protein
L3_083_000G1_scaffold_1259_21
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25113..26390
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5S4L0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ41911.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
hypothetical protein
L3_083_000G1_scaffold_1259_22
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26405..27256
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5RL10_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ41910.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
hypothetical protein
L3_083_000G1_scaffold_1259_23
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27332..28588
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5RTF7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ41909.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
hypothetical protein
L3_083_000G1_scaffold_1259_24
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28746..29324
DNA (579bp) protein (193aa)
Translation initiation factor IF-3 n=1 Tax=Clostridium sp. CAG:122 RepID=R5RTF3_9CLOT
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
translation initiation factor IF-3
L3_083_000G1_scaffold_1259_25
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


29421..29621
DNA (201bp) protein (67aa)
50S ribosomal protein L35 n=1 Tax=Clostridium sp. CAG:122 RepID=R5RMM6_9CLOT
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
LSU ribosomal protein L35P
L3_083_000G1_scaffold_1259_26
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


29639..29995
DNA (357bp) protein (119aa)
50S ribosomal protein L20 n=1 Tax=Clostridium sp. CAG:122 RepID=R5S9X3_9CLOT
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
rplT; 50S ribosomal protein L20
L3_083_000G1_scaffold_1259_27
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30076..30639
DNA (564bp) protein (188aa)
dTDP-4-dehydrorhamnose 3 5-epimerase n=1 Tax=Clostridium sp. CAG:122 RepID=R5S4J9_9CLOT
dTDP-4-dehydrorhamnose 3 5-epimerase {ECO:0000313|EMBL:CCZ41901.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
dTDP-4-dehydrorhamnose 3,5-epimerase
Displaying 27 items

View Taxonomy