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L3_083_000G1_scaffold_1417

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Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_000G1_scaffold_1417_1
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..1126
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5RRC0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ41154.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
L3_083_000G1_scaffold_1417_2
Clostridium sp. CAG:253, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1451..1756
DNA (306bp) protein (102aa)
50S ribosomal protein L21 n=2 Tax=environmental samples RepID=R5SB62_9CLOT
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1262785 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:253.;"
rplU; 50S ribosomal protein L21
L3_083_000G1_scaffold_1417_3
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1778..2119
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5S5S8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ42326.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
hypothetical protein
L3_083_000G1_scaffold_1417_4
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


2124..2411
DNA (288bp) protein (96aa)
50S ribosomal protein L27 n=2 Tax=environmental samples RepID=R5RM43_9CLOT
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
rpmA; 50S ribosomal protein L27
L3_083_000G1_scaffold_1417_5
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2778..4067
DNA (1290bp) protein (430aa)
GTPase Obg n=1 Tax=Clostridium sp. CAG:122 RepID=R5RUN6_9CLOT
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
GTP-binding protein Obg/CgtA
L3_083_000G1_scaffold_1417_6
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4079..4708
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5RNT6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ42323.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
hypothetical protein
L3_083_000G1_scaffold_1417_7
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4754..5539
DNA (786bp) protein (262aa)
Segregation and condensation protein A n=1 Tax=Clostridium sp. CAG:122 RepID=R5SB55_9CLOT
Segregation and condensation protein A {ECO:0000256|HAMAP-Rule:MF_01805, ECO:0000256|SAAS:SAAS00093938}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
chromosome segregation and condensation protein ScpA
L3_083_000G1_scaffold_1417_8
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5645..6235
DNA (591bp) protein (197aa)
Segregation and condensation protein B n=1 Tax=Clostridium sp. CAG:122 RepID=R5S5S2_9CLOT
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
segregation and condensation protein B
L3_083_000G1_scaffold_1417_9
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6377..7030)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5RM39_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ42320.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
hypothetical protein
L3_083_000G1_scaffold_1417_10
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7235..7549
DNA (315bp) protein (105aa)
Sporulation protein YqfC n=1 Tax=Clostridium sp. CAG:122 RepID=R5RUN1_9CLOT
Sporulation protein YqfC {ECO:0000313|EMBL:CCZ42319.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
sporulation protein YqfC
L3_083_000G1_scaffold_1417_11
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7591..8847
DNA (1257bp) protein (419aa)
Putative stage IV sporulation YqfD n=1 Tax=Clostridium sp. CAG:122 RepID=R5RNT3_9CLOT
Putative stage IV sporulation YqfD {ECO:0000313|EMBL:CCZ42318.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
stage IV sporulation YqfD
L3_083_000G1_scaffold_1417_12
Clostridium sp. CAG:253, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8810..9829
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:253 RepID=R6LSB0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB90318.1}; TaxID=1262785 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:253.;"
PhoH family protein
L3_083_000G1_scaffold_1417_13
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9786..11024
DNA (1239bp) protein (413aa)
Metal dependent phosphohydrolase n=1 Tax=Clostridium sp. CAG:122 RepID=R5RM34_9CLOT
Metal dependent phosphohydrolase {ECO:0000313|EMBL:CCZ42315.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
metal dependent phosphohydrolase
L3_083_000G1_scaffold_1417_14
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11062..11571
DNA (510bp) protein (170aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
Endoribonuclease YbeY n=1 Tax=Clostridium sp. CAG:122 RepID=R5RUM6_9CLOT
conserved hypothetical protein TIGR00043
L3_083_000G1_scaffold_1417_15
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11586..13232
DNA (1647bp) protein (549aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5RNS9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ42313.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
stage V sporulation protein B
L3_083_000G1_scaffold_1417_16
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13259..16459
DNA (3201bp) protein (1067aa)
non-specific serine/threonine protein kinase (EC:2.7.11.1)
Non-specific serine/threonine protein kinase n=1 Tax=Clostridium sp. CAG:122 RepID=R5SB47_9CLOT
Non-specific serine/threonine protein kinase {ECO:0000313|EMBL:CCZ42312.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
L3_083_000G1_scaffold_1417_17
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


16623..16970
DNA (348bp) protein (116aa)
50S ribosomal protein L19 n=1 Tax=Clostridium sp. CAG:122 RepID=R5S5R2_9CLOT
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
ribosomal protein L19, bacterial type
L3_083_000G1_scaffold_1417_18
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17502..18821
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5RM29_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ42310.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
L3_083_000G1_scaffold_1417_19
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18953..22708
DNA (3756bp) protein (1252aa)
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase n=1 Tax=Clostridium sp. CAG:122 RepID=R5RUM2_9CLOT
Phosphoribosylformylglycinamidine synthase {ECO:0000313|EMBL:CCZ42309.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
L3_083_000G1_scaffold_1417_20
unknown

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22892..23158
DNA (267bp) protein (89aa)

This feature has no annotations

L3_083_000G1_scaffold_1417_21
Clostridium sp. CAG:253, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23347..23544
DNA (198bp) protein (66aa)
Uncharacterized protein n=2 Tax=environmental samples RepID=R5RNS6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB90326.1}; TaxID=1262785 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:253.;"
Domain of unknown function (DUF1858).
L3_083_000G1_scaffold_1417_22
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23734..25506
DNA (1773bp) protein (591aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5SB41_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ42307.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
hypothetical protein
L3_083_000G1_scaffold_1417_23
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25737..26144
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5S5Q7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ42306.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
hypothetical protein
L3_083_000G1_scaffold_1417_24
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26150..27022
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5RM24_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ42305.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
hypothetical protein
L3_083_000G1_scaffold_1417_25
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27019..27681
DNA (663bp) protein (221aa)
DnaJ-class molecular chaperone with C-terminal Zn finger domain n=1 Tax=Clostridium sp. CAG:122 RepID=R5RUL8_9CLOT
DnaJ-class molecular chaperone with C-terminal Zn finger domain {ECO:0000313|EMBL:CCZ42304.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
DnaJ-class molecular chaperone with C-terminal Zn finger domain
L3_083_000G1_scaffold_1417_26
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27764..27994
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5RNS2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ42303.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
hypothetical protein
L3_083_000G1_scaffold_1417_27
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28183..28398
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5S1E8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ40796.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
hypothetical protein
Displaying 27 items

View Taxonomy