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L3_083_000G1_scaffold_2872

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_000G1_scaffold_2872_1
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(240..542)
DNA (303bp) protein (101aa)
Stress responsive A/B barrel domain protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5RN48_9CLOT
Stress responsive A/B barrel domain protein {ECO:0000313|EMBL:CCZ42695.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
Stress responsive A/B Barrel Domain.
L3_083_000G1_scaffold_2872_2
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(652..1155)
DNA (504bp) protein (168aa)
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
Probable chemoreceptor glutamine deamidase CheD n=1 Tax=Clostridium sp. CAG:122 RepID=R5RVS8_9CLOT
CheD, stimulates methylation of MCP protein
L3_083_000G1_scaffold_2872_3
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1732..3234
DNA (1503bp) protein (501aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5RPY2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ42693.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
L-fucose isomerase and related proteins
L3_083_000G1_scaffold_2872_4
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3500..5029
DNA (1530bp) protein (510aa)
xylulokinase (EC:2.7.1.17)
Xylulokinase n=1 Tax=Clostridium sp. CAG:122 RepID=R5SC94_9CLOT
Xylulokinase {ECO:0000313|EMBL:CCZ42692.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
L3_083_000G1_scaffold_2872_5
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5312..6049)
DNA (738bp) protein (246aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5S6Y5_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CCZ42691.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
DNA-binding protein
L3_083_000G1_scaffold_2872_6
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6378..7631)
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2R0K3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK47103.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
archaeal ATPase family protein
L3_083_000G1_scaffold_2872_7
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8149..8439)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IPJ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS23829.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
Bacterial surface proteins containing Ig-like domains
L3_083_000G1_scaffold_2872_8
Clostridium sp. CAG:253, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8599..9453)
DNA (855bp) protein (285aa)
Nicotinate-nucleotide diphosphorylase (Carboxylating) n=1 Tax=Clostridium sp. CAG:253 RepID=R6M3L2_9CLOT
Nicotinate-nucleotide diphosphorylase (Carboxylating) {ECO:0000313|EMBL:CDB90464.1}; TaxID=1262785 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:253.;"
nicotinate-nucleotide pyrophosphorylase
L3_083_000G1_scaffold_2872_9
Clostridium sp. CAG:253, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9446..10765)
DNA (1320bp) protein (440aa)
Aspartate oxidase (EC:1.4.3.16)
FAD binding domain protein n=1 Tax=Clostridium sp. CAG:253 RepID=R6LSQ4_9CLOT
FAD binding domain protein {ECO:0000313|EMBL:CDB90463.1}; TaxID=1262785 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:253.;"
L3_083_000G1_scaffold_2872_10
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11307..12077
DNA (771bp) protein (257aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Clostridium sp. CAG:122 RepID=R5S7H1_9CLOT
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:CCZ42886.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
methyl-accepting chemotaxis sensory transducer
L3_083_000G1_scaffold_2872_11
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12334..13752)
DNA (1419bp) protein (473aa)
Biotin and thiamin synthesis associated protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5SCS1_9CLOT
Biotin and thiamin synthesis associated protein {ECO:0000313|EMBL:CCZ42887.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
iron-only hydrogenase maturation protein HydG
L3_083_000G1_scaffold_2872_12
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13767..14048)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5RQD6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ42888.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
hypothetical protein
L3_083_000G1_scaffold_2872_13
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14521..15066)
DNA (546bp) protein (182aa)
Acetyltransferases n=1 Tax=Clostridium sp. CAG:122 RepID=R5RWA6_9CLOT
Acetyltransferases {ECO:0000313|EMBL:CCZ42889.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
Acetyltransferases
Displaying 13 items

View Taxonomy