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L3_083_000G1_scaffold_503

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_000G1_scaffold_503_1
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..1480)
DNA (1479bp) protein (493aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9KQ59_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS48473.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
type III restriction protein res subunit
L3_083_000G1_scaffold_503_2
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1484..2758)
DNA (1275bp) protein (425aa)
Uncharacterized protein n=2 Tax=Bacteroides dorei RepID=I9QA35_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY27293.1}; TaxID=997876 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei CL02T12C06.;"
hypothetical protein
L3_083_000G1_scaffold_503_3
Coprococcus eutactus CAG:665, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2755..4488)
DNA (1734bp) protein (578aa)
N-6 DNA methylase n=1 Tax=Coprococcus eutactus CAG:665 RepID=R5VUM6_9FIRM
N-6 DNA methylase {ECO:0000313|EMBL:CCZ94185.1}; TaxID=1263071 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus eutactus CAG:665.;"
N-6 DNA methylase
L3_083_000G1_scaffold_503_4
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4648..5178)
DNA (531bp) protein (177aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0P192_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDS21650.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
L3_083_000G1_scaffold_503_5
unknown

Not on your lists

comp(5182..6903)
DNA (1722bp) protein (574aa)
Type I restriction-modification system methyltransferase subunit n=2 Tax=Clostridiales RepID=D4N0H3_9FIRM
Type I restriction-modification system methyltransferase subunit
Type I restriction-modification system methyltransferase subunit {ECO:0000313|EMBL:CBL38368.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L3_083_000G1_scaffold_503_6
unknown

Not on your lists

comp(6879..7049)
DNA (171bp) protein (57aa)

This feature has no annotations

L3_083_000G1_scaffold_503_7
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7067..7354)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IXJ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS26660.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
L3_083_000G1_scaffold_503_8
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7408..8493)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IXS1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS26658.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
L3_083_000G1_scaffold_503_9
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8477..8713)
DNA (237bp) protein (79aa)
Uncharacterized protein n=2 Tax=environmental samples RepID=R5SX00_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ55389.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
Predicted transcriptional regulator
L3_083_000G1_scaffold_503_10
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9019..11523)
DNA (2505bp) protein (835aa)
Type III restriction enzyme, res subunit n=1 Tax=Veillonella atypica ACS-134-V-Col7a RepID=E1LDR3_9FIRM
Type III restriction enzyme, res subunit {ECO:0000313|EMBL:EFL57338.1}; TaxID=866778 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica ACS-134-V-Col7a.;"
putative uncharacterized protein [DNA/RNA helicase (c2-type; DEAD/DEAH box type)]
L3_083_000G1_scaffold_503_11
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11755..12441)
DNA (687bp) protein (229aa)
SpoVG family protein n=2 Tax=Roseburia RepID=G2SYY2_ROSHA
SpoVG family protein
SpoVG family protein {ECO:0000313|EMBL:AEN98391.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_083_000G1_scaffold_503_12
Eubacterium sp. CAG:161, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12525..13160)
DNA (636bp) protein (212aa)
Transcriptional activator, adenine-specific DNA methyltransferase (EC:2.1.1.72)
MT-A70 n=1 Tax=Eubacterium sp. CAG:161 RepID=R5L9X4_9FIRM
MT-A70 {ECO:0000313|EMBL:CCY69772.1}; TaxID=1262881 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:161.;"
L3_083_000G1_scaffold_503_13
unknown

Not on your lists

comp(13120..13251)
DNA (132bp) protein (44aa)

This feature has no annotations

L3_083_000G1_scaffold_503_14
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13208..13843)
DNA (636bp) protein (212aa)
Sortase n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IXK4_9FIRM
Sortase {ECO:0000313|EMBL:EOS26634.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
LPXTG-site transpeptidase (sortase) family protein
L3_083_000G1_scaffold_503_15
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13840..20661)
DNA (6822bp) protein (2274aa)
DNA methylase n=2 Tax=root RepID=D4KSK8_9FIRM
DNA methylase {ECO:0000313|EMBL:CBL09860.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
DNA methylase
L3_083_000G1_scaffold_503_16
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20673..21536)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9INS8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS20627.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
hypothetical protein
L3_083_000G1_scaffold_503_17
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21566..23449)
DNA (1884bp) protein (628aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IFB6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS20624.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
Spr; cell wall-associated hydrolase
L3_083_000G1_scaffold_503_18
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23508..26072)
DNA (2565bp) protein (855aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IFT6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS20623.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
Domain of unknown function DUF87.
L3_083_000G1_scaffold_503_19
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26085..26561)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IFZ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS20850.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
hypothetical protein
L3_083_000G1_scaffold_503_20
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26563..26964)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 PF5_9FIRM">RepID=R9IPF5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS20847.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
hypothetical protein
L3_083_000G1_scaffold_503_21
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26980..27822)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IGR1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS20943.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
hypothetical protein
L3_083_000G1_scaffold_503_22
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27844..28179)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IFY4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS20845.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
L3_083_000G1_scaffold_503_23
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28376..30502)
DNA (2127bp) protein (709aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 PF3_9FIRM">RepID=R9IPF3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS20842.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
TraG/TraD family protein
L3_083_000G1_scaffold_503_24
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30505..31614)
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IGC2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS20841.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
hypothetical protein
L3_083_000G1_scaffold_503_25
unknown

Not on your lists

comp(31602..31880)
DNA (279bp) protein (93aa)

This feature has no annotations

L3_083_000G1_scaffold_503_26
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31894..33198)
DNA (1305bp) protein (435aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IFY1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS20840.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
hypothetical protein
L3_083_000G1_scaffold_503_27
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33233..34666)
DNA (1434bp) protein (478aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IGH6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS20838.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
hypothetical protein
L3_083_000G1_scaffold_503_28
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34653..34976)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 PF0_9FIRM">RepID=R9IPF0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS20837.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
hypothetical protein
L3_083_000G1_scaffold_503_29
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34976..35485)
DNA (510bp) protein (170aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=D4C8J0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFE13827.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
hypothetical protein
L3_083_000G1_scaffold_503_30
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35939..36904)
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IFX2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS20830.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
hypothetical protein
Displaying items 1-30 of 46 in total

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