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L3_083_000G1_scaffold_945

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_000G1_scaffold_945_1
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..227)
DNA (225bp) protein (75aa)
Transketolase, C-terminal subunit (EC:2.2.1.1)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5S450_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ41746.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
L3_083_000G1_scaffold_945_2
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(245..1114)
DNA (870bp) protein (290aa)
Transketolase, N-terminal subunit (EC:2.2.1.1)
Transketolase N-terminal subunit n=1 Tax=Clostridium sp. CAG:122 RepID=R5RKK2_9CLOT
Transketolase N-terminal subunit {ECO:0000313|EMBL:CCZ41745.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
L3_083_000G1_scaffold_945_3
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1382..2041)
DNA (660bp) protein (220aa)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
Probable transaldolase n=1 Tax=Clostridium sp. CAG:122 RepID=R5RT00_9CLOT
transaldolase
L3_083_000G1_scaffold_945_4
unknown

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comp(2181..2300)
DNA (120bp) protein (40aa)

This feature has no annotations

L3_083_000G1_scaffold_945_5
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2245..4089)
DNA (1845bp) protein (615aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5RM83_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ41743.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
Arylsulfotransferase (ASST).
L3_083_000G1_scaffold_945_6
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4179..4601)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5S9G5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ41742.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
conserved hypothetical protein TIGR00051
L3_083_000G1_scaffold_945_7
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4866..6710
DNA (1845bp) protein (615aa)
ABC transporter ATP-binding protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5S445_9CLOT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCZ41741.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
ATPase components of ABC transporters with duplicated ATPase domains
L3_083_000G1_scaffold_945_8
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6887..7087
DNA (201bp) protein (67aa)
Cold shock-like protein cspC n=1 Tax=Clostridium sp. CAG:122 RepID=R5RKJ5_9CLOT
Cold shock-like protein cspC {ECO:0000313|EMBL:CCZ41740.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
cold-shock DNA-binding domain-containing protein
L3_083_000G1_scaffold_945_9
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7327..8784)
DNA (1458bp) protein (486aa)
alpha-L-fucosidase (EC:3.2.1.51)
Alpha-L-fucosidase n=1 Tax=Clostridium sp. CAG:122 RepID=R5RSZ4_9CLOT
Alpha-L-fucosidase {ECO:0000313|EMBL:CCZ41739.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
L3_083_000G1_scaffold_945_10
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8925..10166)
DNA (1242bp) protein (414aa)
Collagenase and related proteases (EC:3.4.-.-)
Collagenase and related proteases n=1 Tax=Clostridium sp. CAG:122 RepID=R5RM78_9CLOT
Collagenase and related proteases {ECO:0000313|EMBL:CCZ41738.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
L3_083_000G1_scaffold_945_11
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10287..10958)
DNA (672bp) protein (224aa)
O-methyltransferase n=1 Tax=Clostridium sp. CAG:122 RepID=R5S9G0_9CLOT
O-methyltransferase {ECO:0000313|EMBL:CCZ41737.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
O-methyltransferase
L3_083_000G1_scaffold_945_12
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10976..11365)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5S441_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ41736.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
hypothetical protein
L3_083_000G1_scaffold_945_13
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11368..11709)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5RKJ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ41735.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
L3_083_000G1_scaffold_945_14
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11795..13669)
DNA (1875bp) protein (625aa)
Beta-lactamase domain protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5RSY9_9CLOT
Beta-lactamase domain protein {ECO:0000313|EMBL:CCZ41734.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
beta-lactamase domain-containing protein
L3_083_000G1_scaffold_945_15
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13647..13919)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5RM73_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ41733.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
Protein of unknown function (DUF1292).
L3_083_000G1_scaffold_945_16
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13939..14376)
DNA (438bp) protein (146aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
Putative Holliday junction resolvase n=1 Tax=Clostridium sp. CAG:122 RepID=R5S9F8_9CLOT
hypothetical protein
L3_083_000G1_scaffold_945_17
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14578..14838)
DNA (261bp) protein (87aa)
UPF0297 protein BN479_01672 n=1 Tax=Clostridium sp. CAG:122 RepID=R5S436_9CLOT
UPF0297 protein BN479_01672 {ECO:0000256|HAMAP-Rule:MF_01507}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
hypothetical protein
L3_083_000G1_scaffold_945_18
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14925..16313)
DNA (1389bp) protein (463aa)
MiaB-like tRNA modifying enzyme (EC:1.3.1.74)
MiaB-like tRNA modifying enzyme n=1 Tax=Clostridium sp. CAG:122 RepID=R5RKI3_9CLOT
MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:CCZ41730.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
L3_083_000G1_scaffold_945_19
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16523..16801
DNA (279bp) protein (93aa)
PTS HPr component phosphorylation site n=2 Tax=environmental samples RepID=R5RSY5_9CLOT
PTS HPr component phosphorylation site {ECO:0000313|EMBL:CCZ41729.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
PTS HPr component phosphorylation site.
L3_083_000G1_scaffold_945_20
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16979..18160)
DNA (1182bp) protein (394aa)
Probable tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094284}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; Thiamine biosynthesis protein ThiI {ECO:0000256|HAMAP-Rule:MF_00021}; tRNA 4-thiouridine synthase {ECO:0000256|HAMAP-Rule:MF_00021}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
Probable tRNA sulfurtransferase n=1 Tax=Clostridium sp. CAG:122 RepID=R5RM69_9CLOT
thiamine biosynthesis/tRNA modification protein ThiI
L3_083_000G1_scaffold_945_21
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18226..19419)
DNA (1194bp) protein (398aa)
Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes (EC:2.8.1.7)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5S9F4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ41727.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
L3_083_000G1_scaffold_945_22
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19439..20176)
DNA (738bp) protein (246aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Clostridium sp. CAG:122 RepID=R5S431_9CLOT
hypothetical protein
L3_083_000G1_scaffold_945_23
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20329..21081)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5RKH8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ41725.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
hypothetical protein
L3_083_000G1_scaffold_945_24
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21152..23251)
DNA (2100bp) protein (700aa)
UPF0313 protein BN479_01665 n=1 Tax=Clostridium sp. CAG:122 RepID=R5RSY2_9CLOT
UPF0313 protein BN479_01665 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
Fe-S oxidoreductase
L3_083_000G1_scaffold_945_25
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23658..24458
DNA (801bp) protein (267aa)
Cof-like hydrolase n=1 Tax=Clostridium sp. CAG:122 RepID=R5RM65_9CLOT
Cof-like hydrolase {ECO:0000313|EMBL:CCZ41723.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
Cof-like hydrolase
L3_083_000G1_scaffold_945_26
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24643..25086)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5S9F1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ41722.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
hypothetical protein
L3_083_000G1_scaffold_945_27
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25086..26111)
DNA (1026bp) protein (342aa)
His Kinase A (Phosphoacceptor) domain./Histidine kinase-DNA gyrase B-and HSP90-like ATPase./Hpt domain./Response regulator receiver domain n=1 Tax=Clostridium sp. CAG:122 RepID=R5S427_9CLOT
His Kinase A (Phosphoacceptor) domain./Histidine kinase-DNA gyrase B-and HSP90-like ATPase./Hpt domain./Response regulator receiver domain {ECO:0000313|EMBL:CCZ41721.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Hpt domain./Response regulator receiver domain.
L3_083_000G1_scaffold_945_28
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26189..27253)
DNA (1065bp) protein (355aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
aldose 1-epimerase (EC:5.1.3.3)
Aldose 1-epimerase n=1 Tax=Clostridium sp. CAG:122 RepID=R5RKH3_9CLOT
L3_083_000G1_scaffold_945_29
unknown

Not on your lists

comp(27282..27392)
DNA (111bp) protein (37aa)

This feature has no annotations

L3_083_000G1_scaffold_945_30
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27579..29942)
DNA (2364bp) protein (788aa)
Glycoside hydrolase family 31 n=1 Tax=Clostridium sp. CAG:122 RepID=R5RSX7_9CLOT
Glycoside hydrolase family 31 {ECO:0000313|EMBL:CCZ41719.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
glycoside hydrolase family protein
Displaying items 1-30 of 37 in total

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