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L3_083_000G1_scaffold_1818

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_000G1_scaffold_1818_1
unknown

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comp(3..494)
DNA (492bp) protein (164aa)

This feature has no annotations

L3_083_000G1_scaffold_1818_2
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(487..1110)
DNA (624bp) protein (208aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X2V0_9CLOT
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:ENY94082.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
RNA polymerase sigma factor sigma-70 family protein
L3_083_000G1_scaffold_1818_3
Fusobacterium periodonticum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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comp(1183..1803)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Fusobacterium periodonticum ATCC 33693 RepID=D4CWG0_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:EFE86375.1}; TaxID=546275 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium periodonticum ATCC 33693.;"
hypothetical protein
L3_083_000G1_scaffold_1818_4
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(1921..2619)
DNA (699bp) protein (233aa)
Putative ATP synthase F1 delta subunit n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RN39_9FIRM
Putative ATP synthase F1 delta subunit {ECO:0000313|EMBL:CDC44461.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Crp/Fnr family transcriptional regulator
L3_083_000G1_scaffold_1818_5
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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2864..3706
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X3U2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY90568.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
hypothetical protein
L3_083_000G1_scaffold_1818_6
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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3728..4174
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RGH7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC44459.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L3_083_000G1_scaffold_1818_7
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4185..5543
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MYB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY96750.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
amidohydrolase domain-containing protein
L3_083_000G1_scaffold_1818_8
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5621..6388
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:257 RepID=R5WSF3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA06333.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
hypothetical protein
L3_083_000G1_scaffold_1818_9
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6709..7452)
DNA (744bp) protein (248aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IJT8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI58308.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
ABC transporter
L3_083_000G1_scaffold_1818_10
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7455..8246)
DNA (792bp) protein (264aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IJT9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB63808.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
polar amino acid ABC transporter inner membrane subunit
L3_083_000G1_scaffold_1818_11
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8319..9254)
DNA (936bp) protein (312aa)
Amino acid ABC transporter n=1 Tax=Clostridium sp. CAG:7 RepID=R5ILD9_9CLOT
Amino acid ABC transporter {ECO:0000313|EMBL:CCY42953.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
family 3 extracellular solute-binding protein
L3_083_000G1_scaffold_1818_12
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9415..11430)
DNA (2016bp) protein (672aa)
ErfK/YbiS/YcfS/YnhG n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SN26_CLOSY
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:EGA95315.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Putative peptidoglycan binding domain./L,D-transpeptidase catalytic domain.
L3_083_000G1_scaffold_1818_13
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11465..12868)
DNA (1404bp) protein (468aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X6Z3_9CLOT
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:ENY95517.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
ErfK/YbiS/YcfS/YnhG family protein
L3_083_000G1_scaffold_1818_14
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13238..14095)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IPZ1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44170.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_083_000G1_scaffold_1818_15
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14225..15727)
DNA (1503bp) protein (501aa)
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
4-alpha-glucanotransferase n=2 Tax=Clostridiales RepID=R7GRG6_9FIRM
L3_083_000G1_scaffold_1818_16
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15782..16630)
DNA (849bp) protein (283aa)
Metal-dependent hydrolase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M0S1_9FIRM
Metal-dependent hydrolase
Metal-dependent hydrolase {ECO:0000313|EMBL:CBL24833.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_083_000G1_scaffold_1818_17
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16691..18940)
DNA (2250bp) protein (750aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IYY8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41947.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
PTS system maltose-specific IIA component, Glc family (TC 4.A.1.1.11)/PTS system maltose-specific IIB component, Glc family (TC 4.A.1.1.11)/PTS system maltose-specific IIC component, Glc family (TC 4.A.1.1.11)
L3_083_000G1_scaffold_1818_18
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

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19285..20316
DNA (1032bp) protein (344aa)
Transcriptional regulator LacI family n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5YC18_9FIRM
Transcriptional regulator LacI family {ECO:0000313|EMBL:CDA14107.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
transcriptional regulator, LacI family
L3_083_000G1_scaffold_1818_19
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20335..21387
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6ENV4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDG00950.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
hypothetical protein
L3_083_000G1_scaffold_1818_20
[Eubacterium] cellulosolvens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21426..22538)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Eubacterium cellulosolvens 6 RepID=I5AU76_EUBCE
Uncharacterized protein {ECO:0000313|EMBL:EIM57349.1}; TaxID=633697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] cellulosolvens 6.;"
GTPase subunit of restriction endonuclease
Displaying 20 items

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