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L3_083_000G1_scaffold_1924

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_000G1_scaffold_1924_1
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(95..1186)
DNA (1092bp) protein (364aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IEE9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI60098.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
DNA polymerase B exonuclease
L3_083_000G1_scaffold_1924_2
Butyrivibrio proteoclasticus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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1377..1577
DNA (201bp) protein (67aa)
hypothetical protein n=1 Tax=Butyrivibrio sp. AD3002 RepID=UPI0003B66E87
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL34623.1}; TaxID=515622 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316); (Clostridium proteoclasticum).;"
L3_083_000G1_scaffold_1924_3
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1683..2024
DNA (342bp) protein (114aa)
Arsenate reductase and related proteins, glutaredoxin family n=2 Tax=Roseburia RepID=D4L0W5_9FIRM
Arsenate reductase and related proteins, glutaredoxin family
Arsenate reductase and related proteins, glutaredoxin family {ECO:0000313|EMBL:CBL13255.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_083_000G1_scaffold_1924_4
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2045..2641
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FZF9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG92065.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L3_083_000G1_scaffold_1924_5
unknown

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2645..2734
DNA (90bp) protein (30aa)

This feature has no annotations

L3_083_000G1_scaffold_1924_6
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3520..6177
DNA (2658bp) protein (886aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=2 Tax=Clostridium RepID=D6DIK9_CLOSC
L3_083_000G1_scaffold_1924_7
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6221..7525
DNA (1305bp) protein (435aa)
bifunctional folylpolyglutamate synthase/dihydrofolate synthase (EC:6.3.2.17)
Bifunctional protein FolC n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ADC2_9CLOT
Folylpolyglutamate synthase {ECO:0000313|EMBL:KEZ89474.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
L3_083_000G1_scaffold_1924_8
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7558..7692
DNA (135bp) protein (45aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HKF2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25241.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
hypothetical protein
L3_083_000G1_scaffold_1924_9
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7705..9009
DNA (1305bp) protein (435aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RSC1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC48239.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
hypothetical protein
L3_083_000G1_scaffold_1924_10
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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9146..9487
DNA (342bp) protein (114aa)
Anti-sigma factor antagonist n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IET4_9CLOT
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
anti-sigma-factor antagonist
L3_083_000G1_scaffold_1924_11
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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9584..10000
DNA (417bp) protein (139aa)
anti-sigma F factor (EC:2.7.11.1)
Anti-sigma F factor n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IET5_9CLOT
Anti-sigma F factor {ECO:0000313|EMBL:EHI59999.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
L3_083_000G1_scaffold_1924_12
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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10000..10725
DNA (726bp) protein (242aa)
RNA polymerase sigma factor n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EU84_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
FliA/WhiG subfamily RNA polymerase sigma-28 subunit
L3_083_000G1_scaffold_1924_13
unknown

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10848..11078
DNA (231bp) protein (77aa)

This feature has no annotations

L3_083_000G1_scaffold_1924_14
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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11075..11707
DNA (633bp) protein (211aa)
Stage V sporulation protein AA n=1 Tax=Clostridium hathewayi 12489931 RepID=N9W8V8_9CLOT
Stage V sporulation protein AA {ECO:0000313|EMBL:ENY99299.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
stage V sporulation protein AA
L3_083_000G1_scaffold_1924_15
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11697..12188
DNA (492bp) protein (164aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=D3ADB3_9CLOT
Stage V sporulation protein AB {ECO:0000313|EMBL:CCZ61857.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
hypothetical protein
L3_083_000G1_scaffold_1924_16
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12216..12728
DNA (513bp) protein (171aa)
Stage V sporulation protein AC n=9 Tax=Clostridium RepID=N9WXP4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25249.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
SpoVA protein
L3_083_000G1_scaffold_1924_17
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13147..14028
DNA (882bp) protein (294aa)
Thioredoxin reductase (EC:1.8.1.9)
Thioredoxin-disulfide reductase n=1 Tax=Eubacterium sp. CAG:274 RepID=R6Q9K2_9FIRM
Thioredoxin-disulfide reductase {ECO:0000313|EMBL:CDC18567.1}; TaxID=1262888 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:274.;"
L3_083_000G1_scaffold_1924_18
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14219..14653
DNA (435bp) protein (145aa)
Transcriptional regulators n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GVI5_9FIRM
Transcriptional regulators
Uncharacterized protein {ECO:0000313|EMBL:EOS31299.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
L3_083_000G1_scaffold_1924_19
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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14687..16420
DNA (1734bp) protein (578aa)
ABC-type multidrug transport system, ATPase and permease components n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GVI4_9FIRM
ABC-type multidrug transport system, ATPase and permease components
ABC-type multidrug transport system, ATPase and permease components {ECO:0000313|EMBL:CBL41826.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_083_000G1_scaffold_1924_20
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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16426..18339
DNA (1914bp) protein (638aa)
ABC-type multidrug transport system, ATPase and permease components n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GVI3_9FIRM
ABC-type multidrug transport system, ATPase and permease components
ABC-type multidrug transport system, ATPase and permease components {ECO:0000313|EMBL:CBL41825.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_083_000G1_scaffold_1924_21
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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18577..19635
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2ZGX6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13660.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
putative transporter
L3_083_000G1_scaffold_1924_22
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19709..21688
DNA (1980bp) protein (660aa)
TRAP transporter n=3 Tax=Clostridium RepID=E7GGR8_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05530.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
putative transporter
Displaying 22 items

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