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L3_083_000G1_scaffold_2682

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_000G1_scaffold_2682_1
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(131..1897)
DNA (1767bp) protein (589aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5ICW5_9CLOT
L3_083_000G1_scaffold_2682_2
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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2077..2634
DNA (558bp) protein (186aa)
Elongation factor P n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5ICR9_9CLOT
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
translation elongation factor P
L3_083_000G1_scaffold_2682_3
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2751..3260)
DNA (510bp) protein (170aa)
HAD superfamily phosphatase n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5ICR5_9CLOT
HAD superfamily phosphatase {ECO:0000313|EMBL:EHI60686.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
hypothetical protein
L3_083_000G1_scaffold_2682_4
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3275..3736)
DNA (462bp) protein (154aa)
Transcriptional repressor NrdR n=3 Tax=Clostridium RepID=E9SLN9_CLOSY
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
ATP-cone domain-containing protein
L3_083_000G1_scaffold_2682_5
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3837..4037)
DNA (201bp) protein (67aa)
Sporulation protein, YlmC/YmxH family n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ETM7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX98076.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
sporulation protein, YlmC/YmxH family
L3_083_000G1_scaffold_2682_6
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4201..5106)
DNA (906bp) protein (302aa)
Lipoprotein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IE98_9CLOT
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
NLPA lipoprotein
L3_083_000G1_scaffold_2682_7
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5184..5849)
DNA (666bp) protein (222aa)
Binding-protein-dependent transport systems inner membrane component n=2 Tax=Clostridium RepID=R5T935_9CLOT
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CCZ62345.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
binding-protein-dependent transport system inner membrane protein
L3_083_000G1_scaffold_2682_8
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5839..6858)
DNA (1020bp) protein (340aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
D-methionine ABC transporter ATP-binding protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XCZ5_9CLOT
ABC transporter
L3_083_000G1_scaffold_2682_9
unknown

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comp(7006..7104)
DNA (99bp) protein (33aa)

This feature has no annotations

L3_083_000G1_scaffold_2682_10
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7244..7681)
DNA (438bp) protein (146aa)
Transcriptional regulator, Rrf2 family n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PER3_9FIRM
Transcriptional regulator, Rrf2 family {ECO:0000313|EMBL:EDS09846.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
transcriptional regulator, BadM/Rrf2 family
L3_083_000G1_scaffold_2682_11
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

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comp(7766..8698)
DNA (933bp) protein (311aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
cysteine synthase A (EC:2.5.1.47)
Cysteine synthase n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6ICL5_9FIRM
L3_083_000G1_scaffold_2682_12
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8755..10041)
DNA (1287bp) protein (429aa)
O-acetylhomoserine sulfhydrolase (EC:2.5.1.49)
O-acetylhomoserine sulfhydrolase n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6E6I3_9FIRM
O-acetylhomoserine sulfhydrolase {ECO:0000313|EMBL:CDA92211.1}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
L3_083_000G1_scaffold_2682_13
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10316..11719)
DNA (1404bp) protein (468aa)
dipeptidase, putative (EC:3.5.1.18)
Dipeptidase n=2 Tax=Clostridium RepID=R5T9J5_9CLOT
Dipeptidase {ECO:0000313|EMBL:CCZ62348.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
L3_083_000G1_scaffold_2682_14
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11737..12183)
DNA (447bp) protein (149aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IE93_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI60233.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
hypothetical protein
L3_083_000G1_scaffold_2682_15
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12276..13868)
DNA (1593bp) protein (531aa)
Peptide chain release factor 3 n=3 Tax=Clostridium RepID=E7GSA0_CLOSY
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
peptide chain release factor 3
L3_083_000G1_scaffold_2682_16
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14084..15277)
DNA (1194bp) protein (398aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic (EC:6.3.2.5)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IYQ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41862.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L3_083_000G1_scaffold_2682_17
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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15484..16251
DNA (768bp) protein (256aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
Type III pantothenate kinase n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IE89_9CLOT
transcriptional activator, Baf family
Displaying 17 items

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