ggKbase home page

L3_083_000G1_scaffold_2704

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_000G1_scaffold_2704_1
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(314..1816)
DNA (1503bp) protein (501aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Clostridium sp. CAG:7 RepID=R5IHB6_9CLOT
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CCY41465.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_083_000G1_scaffold_2704_2
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1833..2390)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IME1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41464.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_083_000G1_scaffold_2704_3
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2394..3515)
DNA (1122bp) protein (374aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Clostridium sp. CAG:7 RepID=R5IH48_9CLOT
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CCY41463.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_083_000G1_scaffold_2704_4
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3806..4327
DNA (522bp) protein (174aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IXG4_9CLOT
L3_083_000G1_scaffold_2704_5
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4482..5510
DNA (1029bp) protein (343aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IC22_9CLOT
L3_083_000G1_scaffold_2704_6
Lactobacillus mucosae, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5610..6041)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Lactobacillus mucosae LM1 RepID=H3RQ79_9LACO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJT49953.1}; TaxID=1130798 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus mucosae LM1.;"
L3_083_000G1_scaffold_2704_7
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6055..7095)
DNA (1041bp) protein (347aa)
Polysaccharide deacetylase n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SQ61_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF07554.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
polysaccharide deacetylase
L3_083_000G1_scaffold_2704_8
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7327..7563)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IJF3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42205.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
sodium:dicarboxylate symporter
L3_083_000G1_scaffold_2704_9
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7712..8479)
DNA (768bp) protein (256aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IC05_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI60923.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
PHP domain-containing protein
L3_083_000G1_scaffold_2704_10
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8424..8774)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TBU0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ63083.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
hypothetical protein
L3_083_000G1_scaffold_2704_11
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8771..10060)
DNA (1290bp) protein (430aa)
Fe-S ferredoxin n=9 Tax=Clostridium RepID=N9V8Q4_9CLOT
Fe-S ferredoxin {ECO:0000313|EMBL:ENZ59929.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Fe-S cluster domain-containing protein
L3_083_000G1_scaffold_2704_12
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10102..10527)
DNA (426bp) protein (142aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D6G7_9CLOT
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EEG53083.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
anti-sigma regulatory factor, serine/threonine protein kinase
L3_083_000G1_scaffold_2704_13
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10527..10874)
DNA (348bp) protein (116aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IC01_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI60919.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
DRTGG domain-containing protein
L3_083_000G1_scaffold_2704_14
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11129..11623
DNA (495bp) protein (165aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IC00_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI60918.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
NADH dehydrogenase (ubiquinone) 24 kDa subunit
L3_083_000G1_scaffold_2704_15
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11645..12184
DNA (540bp) protein (180aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=3 Tax=Clostridium RepID=E9SMW0_CLOSY
histidine kinase
L3_083_000G1_scaffold_2704_16
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12217..12594
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IBZ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI60916.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
hypothetical protein
L3_083_000G1_scaffold_2704_17
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12607..14394
DNA (1788bp) protein (596aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IBZ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI60915.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
L3_083_000G1_scaffold_2704_18
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14410..16158
DNA (1749bp) protein (583aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IBZ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI60914.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
hydrogenase, Fe-only
Displaying 18 items

View Taxonomy