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L3_083_000G1_scaffold_655

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_000G1_scaffold_655_1
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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889..2553
DNA (1665bp) protein (555aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HT05_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE95577.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
L3_083_000G1_scaffold_655_2
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2583..2810)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CWD8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG56621.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
hypothetical protein
L3_083_000G1_scaffold_655_3
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2931..4400
DNA (1470bp) protein (490aa)
Orn/Lys/Arg decarboxylase major region n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9QZW2_CLOSW
Orn/Lys/Arg decarboxylase major region
Orn/Lys/Arg decarboxylase major region {ECO:0000313|EMBL:ADL02661.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_083_000G1_scaffold_655_4
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4428..5033
DNA (606bp) protein (202aa)
Guanylate kinase n=8 Tax=Clostridium clostridioforme RepID=N9WB77_9CLOT
Guanylate kinase {ECO:0000313|EMBL:ENZ58921.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Guanylate kinase
L3_083_000G1_scaffold_655_5
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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5193..6203
DNA (1011bp) protein (337aa)
DNA polymerase III, delta' subunit {ECO:0000313|EMBL:EFC99758.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EFC99758.1};; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
DNA polymerase III, delta' subunit n=2 Tax=Clostridium RepID=D3AEI4_9CLOT
DNA polymerase III subunit delta'
L3_083_000G1_scaffold_655_6
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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6241..7152
DNA (912bp) protein (304aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5INT2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI56956.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
PSP1 domain-containing protein
L3_083_000G1_scaffold_655_7
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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7145..7885
DNA (741bp) protein (247aa)
Methyltransferase n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VI42_9CLOT
Methyltransferase {ECO:0000313|EMBL:ENY90084.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
type 11 methyltransferase
L3_083_000G1_scaffold_655_8
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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7900..8772
DNA (873bp) protein (291aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X304_9CLOT
conserved hypothetical protein TIGR00096
L3_083_000G1_scaffold_655_9
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8886..9221
DNA (336bp) protein (112aa)
Helix-turn-helix domain protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R8U1_CLOSW
helix-turn-helix domain-containing protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:ADL03916.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_083_000G1_scaffold_655_10
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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9395..10360
DNA (966bp) protein (322aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
3-oxoacyl-(acyl-carrier-protein) synthase III (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5INP6_9CLOT
L3_083_000G1_scaffold_655_11
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10435..10668
DNA (234bp) protein (78aa)
Acyl carrier protein n=4 Tax=Clostridiales RepID=D4MQ62_9FIRM
acyl carrier protein
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
L3_083_000G1_scaffold_655_12
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10765..11691
DNA (927bp) protein (309aa)
putative enoyl-(acyl-carrier-protein) reductase II (EC:1.3.1.-)
Putative enoyl-(Acyl-carrier-protein) reductase II n=1 Tax=Clostridium sp. CAG:81 RepID=R5FWW8_9CLOT
Putative enoyl-(Acyl-carrier-protein) reductase II {ECO:0000313|EMBL:CCY09520.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
L3_083_000G1_scaffold_655_13
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11714..12640
DNA (927bp) protein (309aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
malonyl CoA-acyl carrier protein transacylase (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IRB0_9CLOT
L3_083_000G1_scaffold_655_14
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12634..13374
DNA (741bp) protein (247aa)
3-oxoacyl-[acyl-carrier-protein] reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HSR9_9CLOT
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:EHE95491.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
L3_083_000G1_scaffold_655_15
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13390..14628
DNA (1239bp) protein (413aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC:2.3.1.179)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Clostridium sp. CAG:81 RepID=R5G9K7_9CLOT
L3_083_000G1_scaffold_655_16
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14647..15156
DNA (510bp) protein (170aa)
Acetyl-CoA carboxylase biotin carboxyl carrier protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J6T7_9CLOT
Acetyl-CoA carboxylase biotin carboxyl carrier protein {ECO:0000313|EMBL:CCY44761.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
acetyl-CoA carboxylase, biotin carboxyl carrier protein
L3_083_000G1_scaffold_655_17
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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15167..15595
DNA (429bp) protein (143aa)
beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ (EC:4.2.1.-)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; Beta-hydroxyacyl-ACP dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GV40_9FIRM
L3_083_000G1_scaffold_655_18
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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15627..16982
DNA (1356bp) protein (452aa)
acetyl-CoA carboxylase, biotin carboxylase (EC:6.4.1.2)
Acetyl-CoA carboxylase, biotin carboxylase n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5INN8_9CLOT
Acetyl-CoA carboxylase, biotin carboxylase {ECO:0000313|EMBL:EHI56912.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
L3_083_000G1_scaffold_655_19
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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17042..18760
DNA (1719bp) protein (573aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|SAAS:SAAS00057375}; EC=6.4.1.- {ECO:0000256|SAAS:SAAS00275530};; EC=6.4.1.2 {ECO:0000256|SAAS:SAAS00057486};; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5INN7_9CLOT
L3_083_000G1_scaffold_655_20
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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18772..19875
DNA (1104bp) protein (368aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5INN6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI56910.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
2-nitropropane dioxygenase
L3_083_000G1_scaffold_655_21
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20060..20665
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N1ZXE3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ20566.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
nucleoside recognition domain-containing protein
L3_083_000G1_scaffold_655_22
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20662..21177
DNA (516bp) protein (172aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=A8RM07_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP17841.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
nucleoside recognition domain-containing protein
L3_083_000G1_scaffold_655_23
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21298..21738
DNA (441bp) protein (147aa)
Transcriptional regulator MarR family n=2 Tax=Clostridium RepID=R5SXA9_9CLOT
MarR family transcriptional regulator {ECO:0000313|EMBL:KEZ87915.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
MarR family transcriptional regulator
L3_083_000G1_scaffold_655_24
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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21761..22333
DNA (573bp) protein (191aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5INJ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI56868.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
lipoprotein LpqB
L3_083_000G1_scaffold_655_25
unknown

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22367..22573
DNA (207bp) protein (69aa)

This feature has no annotations

L3_083_000G1_scaffold_655_26
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22725..23945
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7A8L0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD54650.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
LacI family transcriptional regulator
L3_083_000G1_scaffold_655_27
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24047..25018
DNA (972bp) protein (324aa)
Branched-chain amino acid ABC transporter permease protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7AML2_9CLOT
Branched-chain amino acid ABC transporter permease protein {ECO:0000313|EMBL:CDD54651.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
ABC transporter
L3_083_000G1_scaffold_655_28
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25038..26537
DNA (1500bp) protein (500aa)
ABC transporter ATP-binding protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7B008_9CLOT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDD54652.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
monosaccharide ABC transporter ATP-binding protein, CUT2 family
L3_083_000G1_scaffold_655_29
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26548..27519
DNA (972bp) protein (324aa)
Branched-chain amino acid ABC transporter permease protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7A1J9_9CLOT
Branched-chain amino acid ABC transporter permease protein {ECO:0000313|EMBL:CDD54653.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
ABC transporter permease
L3_083_000G1_scaffold_655_30
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27579..28694
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7AGJ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD54654.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
araR; AraR
Displaying items 1-30 of 47 in total

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