ggKbase home page

L3_083_000G1_scaffold_232

Search features with annotation key words

Displaying items 1-30 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_000G1_scaffold_232_1
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

3..176
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6M7F3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB95518.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
L3_083_000G1_scaffold_232_2
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

286..1440
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6NNI6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB99202.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
hypothetical protein
L3_083_000G1_scaffold_232_3
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

1440..1973
DNA (534bp) protein (178aa)
NTP pyrophosphohydrolases including oxidative damage repair enzymes n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MHT4_9FIRM
NTP pyrophosphohydrolases including oxidative damage repair enzymes {ECO:0000313|EMBL:CDB99203.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
MutT2; NTP pyrophosphohydrolase
L3_083_000G1_scaffold_232_4
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

2035..2718
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MTH7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB99204.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
hypothetical protein
L3_083_000G1_scaffold_232_5
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

2829..3167
DNA (339bp) protein (113aa)
Transcriptional regulator PadR family protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MKK0_9FIRM
Transcriptional regulator PadR family protein {ECO:0000313|EMBL:CDB99205.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
PadR family transcriptional regulator
L3_083_000G1_scaffold_232_6
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

3160..3939
DNA (780bp) protein (260aa)
Cell cycle protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MYH9_9FIRM
Cell cycle protein {ECO:0000313|EMBL:CDB99206.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
bacterial cell division membrane protein
L3_083_000G1_scaffold_232_7
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

3951..5924
DNA (1974bp) protein (658aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MHU1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB99208.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
hypothetical protein
L3_083_000G1_scaffold_232_8
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

6016..8166
DNA (2151bp) protein (717aa)
Glycosyl hydrolase family 88 n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MTI4_9FIRM
Glycosyl hydrolase family 88 {ECO:0000313|EMBL:CDB99209.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
glycosyl hydrolase
L3_083_000G1_scaffold_232_9
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

8535..9521
DNA (987bp) protein (329aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MKK2_9FIRM
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CDB99210.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
protein lplB
L3_083_000G1_scaffold_232_10
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

9542..10423
DNA (882bp) protein (294aa)
Carbohydrate ABC transporter membrane protein 2 CUT1 family n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MYI5_9FIRM
Carbohydrate ABC transporter membrane protein 2 CUT1 family {ECO:0000313|EMBL:CDB99211.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
CUT1 family carbohydrate ABC transporter membrane protein 2
L3_083_000G1_scaffold_232_11
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

10532..12046
DNA (1515bp) protein (505aa)
Lipoprotein lplA n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MTI9_9FIRM
Lipoprotein lplA {ECO:0000313|EMBL:CDB99214.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
ABC transporter substrate-binding protein
L3_083_000G1_scaffold_232_12
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

12263..13186
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6NNJ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB99217.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
hypothetical protein
L3_083_000G1_scaffold_232_13
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

13214..13942
DNA (729bp) protein (243aa)
ABC transporter related protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MTJ5_9FIRM
ABC transporter related protein {ECO:0000313|EMBL:CDB99219.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
ABC transporter
L3_083_000G1_scaffold_232_14
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

13939..14682
DNA (744bp) protein (248aa)
Putative membrane protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MYJ3_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CDB99221.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
ABC-2 family transporter protein
L3_083_000G1_scaffold_232_15
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

14688..15833
DNA (1146bp) protein (382aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
two component system histidine kinase (EC:2.7.3.-)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6NNK4_9FIRM
L3_083_000G1_scaffold_232_16
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

15844..16518
DNA (675bp) protein (225aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MTK1_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CDB99224.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_083_000G1_scaffold_232_17
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

16533..17603
DNA (1071bp) protein (357aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MKL4_9FIRM
L3_083_000G1_scaffold_232_18
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(17846..18682)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6NNK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB99227.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
L3_083_000G1_scaffold_232_19
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

18836..19369
DNA (534bp) protein (178aa)
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MHW0_9FIRM
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:CDB99228.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
L3_083_000G1_scaffold_232_20
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

19371..21047
DNA (1677bp) protein (559aa)
Radical SAM domain protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MKL7_9FIRM
Radical SAM domain protein {ECO:0000313|EMBL:CDB99230.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
radical SAM domain-containing protein
L3_083_000G1_scaffold_232_21
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

21026..21967
DNA (942bp) protein (314aa)
Auxin Efflux Carrier n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MYK3_9FIRM
Auxin Efflux Carrier {ECO:0000313|EMBL:CDB99231.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
auxin efflux carrier family protein
L3_083_000G1_scaffold_232_22
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(21964..22380)
DNA (417bp) protein (139aa)
PF06541 domain protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MHW6_9FIRM
PF06541 domain protein {ECO:0000313|EMBL:CDB99233.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
hypothetical protein
L3_083_000G1_scaffold_232_23
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(22440..22865)
DNA (426bp) protein (142aa)
Drug/metabolite transporter DMT family n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MKM2_9FIRM
Drug/metabolite transporter DMT family {ECO:0000313|EMBL:CDB99235.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
hypothetical protein
L3_083_000G1_scaffold_232_24
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(23033..24958)
DNA (1926bp) protein (642aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MHX1_9FIRM
L3_083_000G1_scaffold_232_25
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(25002..25247)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MKM7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB99240.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
hypothetical protein
L3_083_000G1_scaffold_232_26
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(25247..26341)
DNA (1095bp) protein (365aa)
DNA replication and repair protein RecF n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6NNM4_9FIRM
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
recF; recombination protein F
L3_083_000G1_scaffold_232_27
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(26342..26572)
DNA (231bp) protein (77aa)
S4 domain protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MHX5_9FIRM
S4 domain protein {ECO:0000313|EMBL:CDB99243.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
RNA-binding S4 domain-containing protein
L3_083_000G1_scaffold_232_28
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(26597..28858)
DNA (2262bp) protein (754aa)
(P)ppGpp synthetase I SpoT/RelA n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MTM7_9FIRM
(P)ppGpp synthetase I SpoT/RelA {ECO:0000313|EMBL:CDB99244.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
RelA/SpoT family (p)ppGpp synthetase
L3_083_000G1_scaffold_232_29
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(28863..30575)
DNA (1713bp) protein (571aa)
exonuclease RecJ (EC:3.1.-.-)
Exonuclease RecJ n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MYL6_9FIRM
Exonuclease RecJ {ECO:0000313|EMBL:CDB99246.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
L3_083_000G1_scaffold_232_30
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

30722..30868
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6NNM8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB99247.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
ARF/SAR superfamily protein
Displaying items 1-30 of 80 in total

View Taxonomy