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L3_083_000G1_scaffold_387

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_000G1_scaffold_387_1
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

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3..155
DNA (153bp) protein (51aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MU37_9FIRM
L3_083_000G1_scaffold_387_2
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists


171..515
DNA (345bp) protein (115aa)
50S ribosomal protein L17 n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MYZ6_9FIRM
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
rplQ; 50S ribosomal protein L17
L3_083_000G1_scaffold_387_3
unknown

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780..1085
DNA (306bp) protein (102aa)

This feature has no annotations

L3_083_000G1_scaffold_387_4
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(1128..2339)
DNA (1212bp) protein (404aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
icd; Isocitrate dehydrogenase [NADP] (EC:1.1.1.42)
Isocitrate dehydrogenase [NADP] n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MIB4_9FIRM
L3_083_000G1_scaffold_387_5
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

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comp(2435..5287)
DNA (2853bp) protein (951aa)
Putative signaling protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6ML10_9FIRM
Putative signaling protein {ECO:0000313|EMBL:CDB99375.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
signaling protein
L3_083_000G1_scaffold_387_6
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

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5491..6969
DNA (1479bp) protein (493aa)
Stage IV sporulation protein A n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6NNZ6_9FIRM
Stage IV sporulation protein A {ECO:0000313|EMBL:CDB99377.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
stage IV sporulation protein A
L3_083_000G1_scaffold_387_7
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6984..7676
DNA (693bp) protein (231aa)
Conserved protein n=1 Tax=Clostridium tetani (strain Massachusetts / E88) RepID=Q893H8_CLOTE
Uncharacterized protein {ECO:0000313|EMBL:KAJ53916.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
copper amine oxidase domain-containing protein
L3_083_000G1_scaffold_387_8
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(7794..11024)
DNA (3231bp) protein (1077aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MZ58_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB99416.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
glycoside hydrolase
L3_083_000G1_scaffold_387_9
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

11183..11749
DNA (567bp) protein (189aa)
MerR family Transcriptional regulator n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6NP35_9FIRM
MerR family Transcriptional regulator {ECO:0000313|EMBL:CDB99417.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
hypothetical protein
L3_083_000G1_scaffold_387_10
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

11709..12143
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MIG1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB99418.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
hypothetical protein
L3_083_000G1_scaffold_387_11
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(12699..13940)
DNA (1242bp) protein (414aa)
HtrA2 peptidase (EC:3.4.21.108)
Peptidase S1 and S6 chymotrypsin/Hap n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MU94_9FIRM
Peptidase S1 and S6 chymotrypsin/Hap {ECO:0000313|EMBL:CDB99419.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
L3_083_000G1_scaffold_387_12
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

14201..16801
DNA (2601bp) protein (867aa)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
DNA polymerase I (EC:2.7.7.7)
DNA polymerase n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6ML54_9FIRM
L3_083_000G1_scaffold_387_13
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

16995..17843
DNA (849bp) protein (283aa)
Uncharacterized protein n=2 Tax=root RepID=R6MZ65_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB99421.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
adcA; ABC transporter zinc-binding lipoprotein AdcA
L3_083_000G1_scaffold_387_14
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

17845..18507
DNA (663bp) protein (221aa)
Uncharacterized protein n=2 Tax=root RepID=R6NP39_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB99422.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
hypothetical protein
L3_083_000G1_scaffold_387_15
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

18515..19255
DNA (741bp) protein (247aa)
Phosphonate-transporting ATPase n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MIG7_9FIRM
Phosphonate-transporting ATPase {ECO:0000313|EMBL:CDB99423.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
ABC transporter family protein
L3_083_000G1_scaffold_387_16
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

19248..20054
DNA (807bp) protein (269aa)
ABC-type transporter integral membrane subunit n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MU98_9FIRM
ABC-type transporter integral membrane subunit {ECO:0000313|EMBL:CDB99424.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
metal ABC transporter permease
L3_083_000G1_scaffold_387_17
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

20059..20469
DNA (411bp) protein (137aa)
Ferric uptake regulation protein Fur2 n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6ML58_9FIRM
Ferric uptake regulation protein Fur2 {ECO:0000313|EMBL:CDB99425.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
fur2; ferric uptake regulation protein Fur2
L3_083_000G1_scaffold_387_18
Paenibacillus sp. FSL R7-269, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20493..21215)
DNA (723bp) protein (241aa)
copper amine oxidase n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2EB8E
Copper amine oxidase family protein {ECO:0000313|EMBL:ETT56794.1}; TaxID=1226755 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R7-269.;"
hypothetical protein
L3_083_000G1_scaffold_387_19
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(21340..22176)
DNA (837bp) protein (279aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
Phosphomethylpyrimidine kinase type-1 n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MZ72_9FIRM
hypothetical protein
L3_083_000G1_scaffold_387_20
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

22338..23192
DNA (855bp) protein (285aa)
Gamma-D-glutamyl-L-diamino acid endopeptidase I n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MIH8_9FIRM
Gamma-D-glutamyl-L-diamino acid endopeptidase I {ECO:0000313|EMBL:CDB99433.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
gamma-D-glutamyl-L-diamino acid endopeptidase I
L3_083_000G1_scaffold_387_21
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(23251..24099)
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MUA8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB99434.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
L3_083_000G1_scaffold_387_22
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(24121..24813)
DNA (693bp) protein (231aa)
L-ribulose 5-phosphate 4-epimerase (EC:5.1.3.4)
L-ribulose-5-phosphate 4-epimerase n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6ML68_9FIRM
L-ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:CDB99435.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
L3_083_000G1_scaffold_387_23
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(24832..26430)
DNA (1599bp) protein (533aa)
Carbohydrate kinase FGGY-like n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MZ88_9FIRM
Carbohydrate kinase FGGY-like {ECO:0000313|EMBL:CDB99436.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
carbohydrate kinase
L3_083_000G1_scaffold_387_24
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

26618..27763
DNA (1146bp) protein (382aa)
Predicted ATPase (AAA+ superfamily) n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6NP50_9FIRM
Predicted ATPase (AAA+ superfamily) {ECO:0000313|EMBL:CDB99437.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
putative ATPase (AAA+ superfamily)
L3_083_000G1_scaffold_387_25
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

27784..28926
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6ML73_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB99440.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
L3_083_000G1_scaffold_387_26
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

29040..30053
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6NP54_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB99442.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
hypothetical protein
L3_083_000G1_scaffold_387_27
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(30280..31590)
DNA (1311bp) protein (437aa)
Cyclomaltodextrinase n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MUB9_9FIRM
Cyclomaltodextrinase {ECO:0000313|EMBL:CDB99444.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
Glycoside Hydrolase Family 13 protein
L3_083_000G1_scaffold_387_28
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

31742..32473
DNA (732bp) protein (244aa)
Probable transcriptional regulatory protein BN647_02386 n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MZA1_9FIRM
Probable transcriptional regulatory protein BN647_02386 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
DNA-binding regulatory protein
L3_083_000G1_scaffold_387_29
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

32833..33135
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6NP59_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB99447.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
L3_083_000G1_scaffold_387_30
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(33300..34901)
DNA (1602bp) protein (534aa)
Site-specific recombinases DNA invertase Pin homologs n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MIJ4_9FIRM
Site-specific recombinases DNA invertase Pin homologs {ECO:0000313|EMBL:CDB99448.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
Site-specific recombinases, DNA invertase Pin homologs
Displaying items 1-30 of 58 in total

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