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L3_083_000G1_scaffold_4158

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_083_000G1_scaffold_4158_1
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2..118
DNA (117bp) protein (39aa)
Outer membrane protein n=1 Tax=Prevotella copri CAG:164 RepID=R6C2D8_9BACT
Outer membrane protein {ECO:0000313|EMBL:CDA65621.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
L3_083_000G1_scaffold_4158_2
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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305..1390
DNA (1086bp) protein (362aa)
Tryptophan--tRNA ligase {ECO:0000313|EMBL:EFB34913.1}; EC=6.1.1.2 {ECO:0000313|EMBL:EFB34913.1};; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
trpS; tryptophan--tRNA ligase (EC:6.1.1.2)
Tryptophan--tRNA ligase n=1 Tax=Prevotella copri DSM 18205 RepID=D1PEI4_9BACT
L3_083_000G1_scaffold_4158_3
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1430..2716
DNA (1287bp) protein (429aa)
DNA-damage-inducible protein F n=1 Tax=Prevotella copri CAG:164 RepID=R6BST3_9BACT
DNA-damage-inducible protein F {ECO:0000313|EMBL:CDA67163.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
putative efflux protein, MATE family
L3_083_000G1_scaffold_4158_4
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2910..3089
DNA (180bp) protein (60aa)
Tetratricopeptide repeat protein n=3 Tax=root RepID=D1PEI2_9BACT
Conserved domain protein {ECO:0000313|EMBL:CDA67162.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
hypothetical protein
L3_083_000G1_scaffold_4158_5
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3159..3389
DNA (231bp) protein (77aa)
4Fe-4S binding domain protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PEI1_9BACT
4Fe-4S binding domain protein {ECO:0000313|EMBL:EFB34910.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
4Fe-4S binding protein
L3_083_000G1_scaffold_4158_6
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3393..4475
DNA (1083bp) protein (361aa)
3-methyl-2-oxobutanoate dehydrogenase (ferredoxin) (EC:1.2.7.7)
2-oxoglutarate oxidoreductase alpha subunit n=1 Tax=Prevotella copri CAG:164 RepID=R6BV78_9BACT
2-oxoglutarate oxidoreductase alpha subunit {ECO:0000313|EMBL:CDA67160.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
L3_083_000G1_scaffold_4158_7
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4472..5236
DNA (765bp) protein (255aa)
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein n=2 Tax=root RepID=D1PEH9_9BACT
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein {ECO:0000313|EMBL:EFB34908.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
thiamine pyrophosphate protein
L3_083_000G1_scaffold_4158_8
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5277..5822
DNA (546bp) protein (182aa)
2-oxoglutarate oxidoreductase, gamma subunit n=4 Tax=root RepID=K1USN6_9ZZZZ
2-oxoglutarate oxidoreductase gamma subunit {ECO:0000313|EMBL:CDA67158.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
2-oxoacid:ferredoxin/flavodoxin oxidoreductase, gamma subunit
L3_083_000G1_scaffold_4158_9
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6098..6379
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PEH6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFB34905.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
L3_083_000G1_scaffold_4158_10
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6971..7813)
DNA (843bp) protein (281aa)
YitL protein n=1 Tax=Prevotella copri CAG:164 RepID=R6BSG5_9BACT
YitL protein {ECO:0000313|EMBL:CDA66195.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
hypothetical protein
L3_083_000G1_scaffold_4158_11
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7810..8556)
DNA (747bp) protein (249aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708};; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
Lipoprotein releasing system ATP-binding protein n=2 Tax=root RepID=R6BYV5_9BACT
putative lipoprotein releasing system, ATP-binding protein
L3_083_000G1_scaffold_4158_12
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8731..8937)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PEG5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFB34894.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
endopolygalacturonase
L3_083_000G1_scaffold_4158_13
Prevotella sp. CAG:604, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9720..10028
DNA (309bp) protein (103aa)
beta-galactosidase (EC:3.2.1.23)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:604 RepID=R6B186_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDA57948.1}; TaxID=1262932 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:604.;"
L3_083_000G1_scaffold_4158_14
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10124..10561)
DNA (438bp) protein (146aa)
Uncharacterized protein n=2 Tax=Prevotella copri DSM 18205 RepID=D1PHT5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFB33734.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
transposase
Displaying 14 items

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